RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 PDAP1Q13442 181 aaKnown RBP9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 CCDC191Q8NCU4 936 aa9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 RAET1EQ8TD07 263 aa9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 GUCD1Q96NT3 240 aa9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 SNCAIPQ9Y6H5 919 aa9.99□□□□□ -0.81
SMARCE1-217ENST00000580654 SNAP23O00161 211 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 MYO1BO43795 1136 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 CETPP11597 493 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 PRKCZQ05513 592 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 RIC3Q7Z5B4 369 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 DIS3LQ8TF46 1054 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 PHAXQ9H814 394 aaKnown RBP9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 ZSWIM6Q9HCJ5 1215 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 HYPKQ9NX55 129 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 ZMYND8Q9ULU4 1186 aaPredicted RBP9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 GABRQQ9UN88 632 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 MAPK8IP3Q9UPT6 1336 aa9.98□□□□□ -0.81
SMARCE1-217ENST00000580654 IRF6O14896 467 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 HOXB7P09629 217 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 COL9A1P20849 921 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 UBXN2AP68543 259 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 C7orf61Q8IZ16 206 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 TDHQ8IZJ6 230 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 PAWRQ96IZ0 340 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 CWC25Q9NXE8 425 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 BIN2Q9UBW5 565 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 ZNF70Q9UC06 446 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 DAXXQ9UER7 740 aaPredicted RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 RPTORQ8N122 1335 aa9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 LAMA2P24043 3122 aaKnown RBP9.97□□□□□ -0.81
SMARCE1-217ENST00000580654 DDX60LQ5H9U9 1706 aaKnown RBP9.96□□□□□ -0.81
SMARCE1-217ENST00000580654 SYN1P17600 705 aa9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 HOXD10P28358 340 aa9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 MAGEA10P43363 369 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 FKBP1AP62942 108 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 HELBQ8NG08 1087 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 TDRD3Q9H7E2 651 aaKnown RBP9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 RAPGEFL1Q9UHV5 662 aa9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 JAG2Q9Y219 1238 aa9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 CSADQ9Y600 493 aa9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 COL2A1P02458 1487 aaPredicted RBP9.96□□□□□ -0.82
SMARCE1-217ENST00000580654 WDHD1O75717 1129 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 TFRCP02786 760 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 INHAP05111 366 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 BCRP11274 1271 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 IL1R1P14778 569 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 ELNP15502 786 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 PLA2G5P39877 138 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 TMPOP42166 694 aaKnown RBP9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 PPIL2Q13356 520 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 SNAPC2Q13487 334 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 MOGSQ13724 837 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 TNFAIP1Q13829 316 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 ERO1BQ86YB8 467 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 ZKSCAN4Q969J2 545 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 DEFB118Q96PH6 123 aa9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 PAK6Q9NQU5 681 aaPredicted RBP9.95□□□□□ -0.82
SMARCE1-217ENST00000580654 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 TCP10L2B9ZVM9 353 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 PDHXO00330 501 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 ADCY3O60266 1144 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 IGKV5-2P06315 115 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 RBM5P52756 815 aaKnown RBP eCLIP9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 CHRNDQ07001 517 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 DUSP27Q5VZP5 1158 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 C15orf52Q6ZUT6 534 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 ANKRD23Q86SG2 305 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 METTL22Q9BUU2 404 aaPredicted RBP9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 ANKRD2Q9GZV1 360 aa9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 LAS1LQ9Y4W2 734 aaKnown RBP9.94□□□□□ -0.82
SMARCE1-217ENST00000580654 TAF5LO75529 589 aa9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 IGHMBP2P38935 993 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 FAM109BQ6ICB4 259 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 NECAB2Q7Z6G3 386 aa9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
SMARCE1-217ENST00000580654 CAPN2P17655 700 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 ITGA6P23229 1130 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 FLT3LGP49771 235 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 FCGRTP55899 365 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 LMOD3Q0VAK6 560 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 DZIP1LQ8IYY4 767 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 PXYLP1Q8TE99 480 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 FAM161BQ96MY7 647 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 WRNIP1Q96S55 665 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 PCGF6Q9BYE7 350 aa9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 UBE2OQ9C0C9 1292 aaKnown RBP9.92□□□□□ -0.82
SMARCE1-217ENST00000580654 CYP2C8P10632 490 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 KCNJ4P48050 445 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 CACNB3P54284 484 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 PPATQ06203 517 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 GPAT2Q6NUI2 795 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 SERPINA10Q9UK55 444 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 TTF2Q9UNY4 1162 aaKnown RBP9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
SMARCE1-217ENST00000580654 FAM205AQ6ZU69 1335 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms