RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK5RAP3-218ENST00000580391 C10orf71Q711Q0 1435 aa17.54■□□□□ 0.4
CDK5RAP3-218ENST00000580391 H0YIN7 160 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 RIMBP2O15034 1052 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 LDHBP07195 334 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 MCM5P33992 734 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 MPNDQ8N594 471 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 INCENPQ9NQS7 918 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 TRDNQ13061 729 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CLEC17AQ6ZS10 378 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ZNF646O15015 1829 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
CDK5RAP3-218ENST00000580391 B4E1Z4 1266 aa17.52■□□□□ 0.4
CDK5RAP3-218ENST00000580391 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
CDK5RAP3-218ENST00000580391 ADAMTSL1Q8N6G6 1762 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SCRN1Q12765 414 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 DIXDC1Q155Q3 683 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 GOLGB1Q14789 3259 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SCN9AQ15858 1988 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SMIM22K7EJ46 135 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
CDK5RAP3-218ENST00000580391 PFKFB2O60825 505 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SYT1P21579 422 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 PPARAQ07869 468 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 AKNAD1Q5T1N1 836 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 TMED8Q6PL24 325 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 STK11IPQ8N1F8 1099 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 STAG1Q8WVM7 1258 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 FOCADQ5VW36 1801 aa17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 DDX60LQ5H9U9 1706 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP3-218ENST00000580391 JAK2O60674 1132 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 WDR33Q9C0J8 1336 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CYP2D7A0A087X1C5 515 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MINDY4BA8MYZ0 360 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 STX6O43752 255 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MFSD14BQ5SR56 506 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CRNKL1Q9BZJ0 848 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 COA1Q9GZY4 146 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 FAM205AQ6ZU69 1335 aa17.49■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 PDIA3P30101 505 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 GTF2IP78347 998 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ZC3H12CQ9C0D7 883 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MROH7-TTC4A0A0A0MT08 1334 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SH2B2O14492 632 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 IGSF3O75054 1194 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 KDM4AO75164 1064 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 EVCP57679 992 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 DOK7Q18PE1 504 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 RRP12Q5JTH9 1297 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MCTP1Q6DN14 999 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CNKSR1Q969H4 720 aa17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ZNF274Q96GC6 653 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 DCP1AQ9NPI6 582 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MYH1P12882 1939 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 GSTO1P78417 241 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 EVX2Q03828 476 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 FBXW7Q969H0 707 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 RTFDC1Q9BY42 306 aaPredicted RBP17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CNNM2Q9H8M5 875 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 TOMM22Q9NS69 142 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ANAPC4Q9UJX5 808 aa17.47■□□□□ 0.39
CDK5RAP3-218ENST00000580391 GOLGA8BA8MQT2 603 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CTDNEP1O95476 244 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ZSCAN22P10073 491 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 GIMAP6Q6P9H5 292 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 CTR9Q6PD62 1173 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SH3RF3Q8TEJ3 882 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 KRT23Q9C075 422 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SENP2Q9HC62 589 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ANGEL1Q9UNK9 670 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MTMR6Q9Y217 621 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 MYH15Q9Y2K3 1946 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SMARCC2Q8TAQ2 1214 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 EYA3Q99504 573 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 ZSWIM5Q9P217 1185 aa17.46■□□□□ 0.39
CDK5RAP3-218ENST00000580391 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 USP17L12C9JPN9 530 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 USP17L21D6R901 530 aa17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 FOXD4L6Q3SYB3 417 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-218ENST00000580391 FOXD4L3Q6VB84 417 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms