RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
PPP4R1-216ENST00000580283 FAM13AO94988 1023 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 EIF1AXP47813 144 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 KIF1AQ12756 1690 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 FAM35AQ86V20 835 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 MICALL1Q8N3F8 863 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 TLR7Q9NYK1 1049 aaKnown RBP9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 PLEKHH1Q9ULM0 1364 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 THSD7AQ9UPZ6 1657 aa9.69□□□□□ -0.86
PPP4R1-216ENST00000580283 LRPPRCP42704 1394 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 LILRB5O75023 590 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 CPB1P15086 417 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 NRLP54845 237 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 GPLD1P80108 840 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 MLLT1Q03111 559 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 PLAURQ03405 335 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 DNM1Q05193 864 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 PSAPL1Q6NUJ1 521 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 TRPM4Q8TD43 1214 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 NUDT8Q8WV74 236 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 EDEM1Q92611 657 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 NUDT16Q96DE0 195 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 JPH1Q9HDC5 661 aaPredicted RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 ANO2Q9NQ90 1003 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 IFT172Q9UG01 1749 aa9.68□□□□□ -0.86
PPP4R1-216ENST00000580283 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
PPP4R1-216ENST00000580283 MMP20O60882 483 aa9.67□□□□□ -0.86
PPP4R1-216ENST00000580283 ALYREFQ86V81 257 aaKnown RBP9.67□□□□□ -0.86
PPP4R1-216ENST00000580283 SUV39H2Q9H5I1 410 aa9.67□□□□□ -0.86
PPP4R1-216ENST00000580283 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 TECPR2O15040 1411 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 TNS3Q68CZ2 1445 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 KNDC1Q76NI1 1749 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 TRPM3Q9HCF6 1732 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 CRYBG1Q9Y4K1 1723 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 RGS9O75916 674 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 TTC39BQ5VTQ0 682 aaPredicted RBP9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 C8orf86Q6ZUL3 223 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 PLVAPQ9BX97 442 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 PRDM6Q9NQX0 595 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 BTG4Q9NY30 223 aa9.66□□□□□ -0.86
PPP4R1-216ENST00000580283 COL14A1Q05707 1796 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 SPATA31A5Q5VU36 1347 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 SPATA31A7Q8IWB4 1347 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 CHD4Q14839 1912 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 ZBTB42B2RXF5 422 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 TRIM37O94972 964 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 EIF2AK2P19525 551 aaKnown RBP9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 MZF1P28698 734 aaPredicted RBP9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 SOX18P35713 384 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 C8orf34Q49A92 452 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 C20orf204Q6ZNR8 217 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 HFE2Q6ZVN8 426 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 TRIM11Q96F44 468 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 DCAF5Q96JK2 942 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 STK26Q9P289 416 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 EGFL7Q9UHF1 273 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 NAGPAQ9UK23 515 aa9.65□□□□□ -0.86
PPP4R1-216ENST00000580283 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 ADGRF5Q8IZF2 1346 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 GHRHP01286 108 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 PDGFAP04085 211 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 NPR3P17342 541 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 SERPINB4P48594 390 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 PDE12Q6L8Q7 609 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 ZNF438Q7Z4V0 828 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 GLYCTKQ8IVS8 523 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 NSUN5Q96P11 429 aaKnown RBP9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
PPP4R1-216ENST00000580283 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 COL8A1P27658 744 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 KCTD17Q8N5Z5 321 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 CCER1Q8TC90 406 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 ABI2Q9NYB9 513 aaPredicted RBP9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 FRRS1LQ9P0K9 344 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 NRXN1Q9ULB1 1477 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
PPP4R1-216ENST00000580283 LOC102724428A0A0B4J2F2 783 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 H3BRB1 525 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 ICMTO60725 284 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 APBA3O96018 575 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 ITGAEP38570 1179 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 SIK1P57059 783 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 PRRT3Q5FWE3 981 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 PERM1Q5SV97 790 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 OR13H1Q8NG92 308 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 ELP3Q9H9T3 547 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 POLIQ9UNA4 740 aa9.62□□□□□ -0.87
PPP4R1-216ENST00000580283 CASZ1Q86V15 1759 aa9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 J3QW42 95 aa9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 KCNQ2O43526 872 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms