RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 GAKO14976 1311 aa22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 TNNI2P48788 182 aa22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 NSUN4Q96CB9 384 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 USP40Q9NVE5 1235 aa22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 TMOD2Q9NZR1 351 aa22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 RAI14Q9P0K7 980 aa22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 ANGEL1Q9UNK9 670 aaKnown RBP22.86■■□□□ 1.25
PPP4R1-215ENST00000580182 SMARCA5O60264 1052 aaPredicted RBP22.85■■□□□ 1.25
PPP4R1-215ENST00000580182 NFIAQ12857 509 aa22.85■■□□□ 1.25
PPP4R1-215ENST00000580182 SUPT20HL1Q3ZLR7 823 aa22.85■■□□□ 1.25
PPP4R1-215ENST00000580182 LRP2BPQ9P2M1 347 aa22.85■■□□□ 1.25
PPP4R1-215ENST00000580182 IFIT2P09913 472 aaKnown RBP22.84■■□□□ 1.25
PPP4R1-215ENST00000580182 ARMC9Q7Z3E5 817 aa22.84■■□□□ 1.25
PPP4R1-215ENST00000580182 FAM163AQ96GL9 167 aaPredicted RBP22.84■■□□□ 1.25
PPP4R1-215ENST00000580182 DCTPP1Q9H773 170 aa22.84■■□□□ 1.25
PPP4R1-215ENST00000580182 PIH1D3Q9NQM4 214 aaKnown RBP22.84■■□□□ 1.25
PPP4R1-215ENST00000580182 MROH7-TTC4A0A0A0MT08 1334 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 SLC10A3P09131 477 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 MAP2K2P36507 400 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 BTDP43251 543 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 FKBP1CQ5VVH2 108 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 FAM83AQ86UY5 434 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 RASAL3Q86YV0 1011 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 CCDC102AQ96A19 550 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 LRRCC1Q9C099 1032 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 WBP1LQ9NX94 342 aa22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 SUPT16HQ9Y5B9 1047 aaKnown RBP22.83■■□□□ 1.25
PPP4R1-215ENST00000580182 MYO5AQ9Y4I1 1855 aaKnown RBP22.83■■□□□ 1.24
PPP4R1-215ENST00000580182 USP2O75604 605 aaPredicted RBP22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 TCP10Q12799 353 aa22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 LDLRAD1Q5T700 205 aa22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 SLF2Q8IX21 1173 aa22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 ANTXR1Q9H6X2 564 aa22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 FAM198AQ9UFP1 575 aa22.82■■□□□ 1.24
PPP4R1-215ENST00000580182 GPR75-ASB3A0A0A6YYF3 556 aa22.81■■□□□ 1.24
PPP4R1-215ENST00000580182 PPP1R12BO60237 982 aaPredicted RBP22.81■■□□□ 1.24
PPP4R1-215ENST00000580182 NOGQ13253 232 aa22.81■■□□□ 1.24
PPP4R1-215ENST00000580182 MAP3K11Q16584 847 aa22.81■■□□□ 1.24
PPP4R1-215ENST00000580182 FOXN1O15353 648 aa22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 GSTO1P78417 241 aa22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 MAP2K1Q02750 393 aaPredicted RBP22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 ZFPM1Q8IX07 1006 aa22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 FAM151AQ8WW52 585 aa22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 CLMNQ96JQ2 1002 aa22.8■■□□□ 1.24
PPP4R1-215ENST00000580182 LDHCP07864 332 aa22.79■■□□□ 1.24
PPP4R1-215ENST00000580182 KIF23Q02241 960 aaPredicted RBP22.79■■□□□ 1.24
PPP4R1-215ENST00000580182 RGS3P49796 1198 aa22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 RHBDL3P58872 404 aa22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 MKRN3Q13064 507 aaKnown RBP22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 NAA16Q6N069 864 aaPredicted RBP22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 ADGRA1Q86SQ6 560 aa22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 EXOC6Q8TAG9 804 aa22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 DDX4Q9NQI0 724 aaKnown RBP22.78■■□□□ 1.24
PPP4R1-215ENST00000580182 RFX7Q2KHR2 1363 aa22.77■■□□□ 1.24
PPP4R1-215ENST00000580182 MAST2Q6P0Q8 1798 aa22.77■■□□□ 1.24
PPP4R1-215ENST00000580182 WDHD1O75717 1129 aaPredicted RBP22.77■■□□□ 1.24
PPP4R1-215ENST00000580182 IREB2P48200 963 aaKnown RBP22.77■■□□□ 1.24
PPP4R1-215ENST00000580182 IDI2Q9BXS1 227 aa22.77■■□□□ 1.24
PPP4R1-215ENST00000580182 RPAP1Q9BWH6 1393 aaPredicted RBP22.76■■□□□ 1.23
PPP4R1-215ENST00000580182 IDH1O75874 414 aaKnown RBP22.76■■□□□ 1.23
PPP4R1-215ENST00000580182 PICALMQ13492 652 aa22.76■■□□□ 1.23
PPP4R1-215ENST00000580182 MIGA2Q7L4E1 593 aa22.76■■□□□ 1.23
PPP4R1-215ENST00000580182 AIDAQ96BJ3 306 aa22.76■■□□□ 1.23
PPP4R1-215ENST00000580182 SH3BP5LQ7L8J4 393 aa22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 SLC10A4Q96EP9 437 aa22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 EDC3Q96F86 508 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 CSRNP1Q96S65 589 aa22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 DNAJC2Q99543 621 aaKnown RBP22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 BOLA2Q9H3K6 86 aa22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 AATFQ9NY61 560 aaKnown RBP eCLIP22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 OTOFQ9HC10 1997 aa22.75■■□□□ 1.23
PPP4R1-215ENST00000580182 ENTPD3O75355 529 aa22.74■■□□□ 1.23
PPP4R1-215ENST00000580182 ANKRD13AQ8IZ07 590 aa22.74■■□□□ 1.23
PPP4R1-215ENST00000580182 SH3RF3Q8TEJ3 882 aaPredicted RBP22.74■■□□□ 1.23
PPP4R1-215ENST00000580182 TSKSQ9UJT2 592 aa22.74■■□□□ 1.23
PPP4R1-215ENST00000580182 DOCK2Q92608 1830 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 GOLIM4O00461 696 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 ATP5JP18859 108 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 CYP7A1P22680 504 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 MAGEB6Q8N7X4 407 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 BEGAINQ9BUH8 593 aa22.73■■□□□ 1.23
PPP4R1-215ENST00000580182 AK9Q5TCS8 1911 aa22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 DDTLA6NHG4 134 aaPredicted RBP22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 SLURP2P0DP57 97 aa22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 MAP3K9P80192 1104 aa22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 SPRYD7Q5W111 196 aa22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 ELP3Q9H9T3 547 aa22.72■■□□□ 1.23
PPP4R1-215ENST00000580182 UNCXA6NJT0 531 aa22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 HSPA8P11142 646 aaKnown RBP22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 GJA5P36382 358 aa22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 CTCFP49711 727 aaPredicted RBP22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 PPP4CP60510 307 aa22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 DYNLL1P63167 89 aaKnown RBP22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 IRX6P78412 446 aaPredicted RBP22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 MAP3K12Q12852 859 aa22.71■■□□□ 1.23
PPP4R1-215ENST00000580182 VGLL4Q14135 290 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms