RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 ZBTB3Q9H5J0 574 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 UFL1O94874 794 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 RPS8P62241 208 aaKnown RBP4.32□□□□□ -1.72
CDH19-204ENST00000579658 FKBP1AP62942 108 aaKnown RBP4.32□□□□□ -1.72
CDH19-204ENST00000579658 FGD1P98174 961 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 HNRNPUQ00839 825 aaKnown RBP eCLIP4.32□□□□□ -1.72
CDH19-204ENST00000579658 LMOD3Q0VAK6 560 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 PROSER3Q2NL68 480 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 TTLL7Q6ZT98 887 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 NGEFQ8N5V2 710 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 PXYLP1Q8TE99 480 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 SH3TC2Q8TF17 1288 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 C1QTNF1Q9BXJ1 281 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 COA1Q9GZY4 146 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 CRISPLD2Q9H0B8 497 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 RNF208Q9H0X6 261 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 STAP2Q9UGK3 403 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 TRMT112Q9UI30 125 aaKnown RBP4.32□□□□□ -1.72
CDH19-204ENST00000579658 RIPOR2Q9Y4F9 1068 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 ZNF521Q96K83 1311 aa4.32□□□□□ -1.72
CDH19-204ENST00000579658 CCL15-CCL14A0A0B4J2E2 113 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 MFSD10Q14728 455 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 CCL15Q16663 113 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 CCDC27Q2M243 656 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 IRX2Q9BZI1 471 aaPredicted RBP4.31□□□□□ -1.72
CDH19-204ENST00000579658 UBE2OQ9C0C9 1292 aaKnown RBP4.31□□□□□ -1.72
CDH19-204ENST00000579658 CWC22Q9HCG8 908 aaKnown RBP4.31□□□□□ -1.72
CDH19-204ENST00000579658 MYPNQ86TC9 1320 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 MYL6BP14649 208 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 BCAMP50895 628 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 FCGRTP55899 365 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 PDIA6Q15084 440 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 NBPF9Q3BBW0 867 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 DUSP27Q5VZP5 1158 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 MAFAQ8NHW3 353 aaPredicted RBP4.31□□□□□ -1.72
CDH19-204ENST00000579658 MS4A4AQ96JQ5 239 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 DEFB129Q9H1M3 183 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 IFT57Q9NWB7 429 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 ANKIB1Q9P2G1 1089 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 PCDHB8Q9UN66 801 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 HCN4Q9Y3Q4 1203 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 PCDHB13Q9Y5F0 798 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 CSADQ9Y600 493 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 IRS2Q9Y4H2 1338 aa4.31□□□□□ -1.72
CDH19-204ENST00000579658 CARNS1A5YM72 827 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 TFRCP02786 760 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 FECHP22830 423 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 GNAI1P63096 354 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 EXOSC9Q06265 439 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 TRIM28Q13263 835 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 SNAPC2Q13487 334 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 CAMK2BQ13554 666 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 ANKRD23Q86SG2 305 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 BRI3BPQ8WY22 251 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 OPTNQ96CV9 577 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 GUCD1Q96NT3 240 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 PTPN18Q99952 460 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 REPIN1Q9BWE0 567 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 PPP4R2Q9NY27 417 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 BIN2Q9UBW5 565 aaPredicted RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 ZBED9Q6R2W3 1325 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 CUL9Q8IWT3 2517 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 DDX60LQ5H9U9 1706 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 SPDYE5A6NIY4 337 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 MS4A1P11836 297 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 HCLS1P14317 486 aaPredicted RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 TNNI2P48788 182 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 CCDC152Q4G0S7 254 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 C17orf99Q6UX52 265 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 Q7L0L9 218 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 LRP10Q7Z4F1 713 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 WDR63Q8IWG1 891 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 CELF1Q92879 486 aaKnown RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 DDRGK1Q96HY6 314 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 PAK6Q9NQU5 681 aaPredicted RBP4.3□□□□□ -1.72
CDH19-204ENST00000579658 KCNQ5Q9NR82 932 aa4.3□□□□□ -1.72
CDH19-204ENST00000579658 USP2O75604 605 aaPredicted RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 OSBPP22059 807 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 GJA5P36382 358 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 MAGEA10P43363 369 aaPredicted RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 PSMC4P43686 418 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 MAP3K9P80192 1104 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 SLFN5Q08AF3 891 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 PPIL2Q13356 520 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 MTFR1Q15390 333 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 ERO1BQ86YB8 467 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 ATXN2LQ8WWM7 1075 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 CLMNQ96JQ2 1002 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 CDC5LQ99459 802 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 NBPF3Q9H094 633 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 PHAXQ9H814 394 aaKnown RBP4.29□□□□□ -1.72
CDH19-204ENST00000579658 CHPF2Q9P2E5 772 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 LEMD3Q9Y2U8 911 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 MYH3P11055 1940 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 ZSWIM8A7E2V4 1837 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 MAST2Q6P0Q8 1798 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 VAMP4O75379 141 aa4.29□□□□□ -1.72
CDH19-204ENST00000579658 FMNL1O95466 1100 aaPredicted RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms