RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 MCAMP43121 646 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 FKBP1CQ5VVH2 108 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 NAA16Q6N069 864 aaPredicted RBP8□□□□□ -1.13
TRAF4-213ENST00000578917 SIRT2Q8IXJ6 389 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 LRRCC1Q9C099 1032 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 DBNLQ9UJU6 430 aaKnown RBP8□□□□□ -1.13
TRAF4-213ENST00000578917 FZD1Q9UP38 647 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 DAGLAQ9Y4D2 1042 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 CSADQ9Y600 493 aa8□□□□□ -1.13
TRAF4-213ENST00000578917 PDS5AQ29RF7 1337 aaKnown RBP8□□□□□ -1.13
TRAF4-213ENST00000578917 FOXN1O15353 648 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 CA12O43570 354 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 USP2O75604 605 aaPredicted RBP7.99□□□□□ -1.13
TRAF4-213ENST00000578917 BTDP43251 543 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 ZAP70P43403 619 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 LBX1P52954 281 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 MAP3K12Q12852 859 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 PICALMQ13492 652 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 DCAF15Q66K64 600 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 MIGA2Q7L4E1 593 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 FAM83AQ86UY5 434 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 REM2Q8IYK8 340 aaPredicted RBP7.99□□□□□ -1.13
TRAF4-213ENST00000578917 ANKRD13AQ8IZ07 590 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 FAM151AQ8WW52 585 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 ZNF512BQ96KM6 892 aaPredicted RBP7.99□□□□□ -1.13
TRAF4-213ENST00000578917 DNAJC2Q99543 621 aaKnown RBP7.99□□□□□ -1.13
TRAF4-213ENST00000578917 TLR7Q9NYK1 1049 aaKnown RBP7.99□□□□□ -1.13
TRAF4-213ENST00000578917 ADAMTSL1Q8N6G6 1762 aa7.99□□□□□ -1.13
TRAF4-213ENST00000578917 FAM155AB1AL88 458 aaPredicted RBP7.98□□□□□ -1.13
TRAF4-213ENST00000578917 TRPA1O75762 1119 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 CYP2E1P05181 493 aaPredicted RBP7.98□□□□□ -1.13
TRAF4-213ENST00000578917 SLC10A3P09131 477 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 PLCG2P16885 1265 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 CYP7A1P22680 504 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 MAP3K9P80192 1104 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 TTF1Q15361 905 aaPredicted RBP7.98□□□□□ -1.13
TRAF4-213ENST00000578917 LDLRAD1Q5T700 205 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 RASAL3Q86YV0 1011 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 NSUN4Q96CB9 384 aaKnown RBP7.98□□□□□ -1.13
TRAF4-213ENST00000578917 FAM163AQ96GL9 167 aaPredicted RBP7.98□□□□□ -1.13
TRAF4-213ENST00000578917 GPATCH3Q96I76 525 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 CSRNP1Q96S65 589 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 CRBNQ96SW2 442 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 ZIC5Q96T25 663 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 TSKSQ9UJT2 592 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 MROH7-TTC4A0A0A0MT08 1334 aa7.98□□□□□ -1.13
TRAF4-213ENST00000578917 GPR75-ASB3A0A0A6YYF3 556 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 UNCXA6NJT0 531 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 ZBTB22O15209 634 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
TRAF4-213ENST00000578917 ENTPD3O75355 529 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 RGS3P49796 1198 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 INHBEP58166 350 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 NFIAQ12857 509 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 COL13A1Q5TAT6 717 aaPredicted RBP7.97□□□□□ -1.13
TRAF4-213ENST00000578917 SPRYD7Q5W111 196 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 OTUD7BQ6GQQ9 843 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 CDAN1Q8IWY9 1227 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 TEX11Q8IYF3 940 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 TNS4Q8IZW8 715 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 CLMNQ96JQ2 1002 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 TEPSINQ96N21 525 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 WRNIP1Q96S55 665 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 TRIM34Q9BYJ4 488 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 ZNF341Q9BYN7 854 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 PIH1D3Q9NQM4 214 aaKnown RBP7.97□□□□□ -1.13
TRAF4-213ENST00000578917 AATFQ9NY61 560 aaKnown RBP eCLIP7.97□□□□□ -1.13
TRAF4-213ENST00000578917 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
TRAF4-213ENST00000578917 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
TRAF4-213ENST00000578917 COL1A1P02452 1464 aaPredicted RBP7.96□□□□□ -1.13
TRAF4-213ENST00000578917 GOLIM4O00461 696 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 WDHD1O75717 1129 aaPredicted RBP7.96□□□□□ -1.14
TRAF4-213ENST00000578917 MAP4K4O95819 1239 aaPredicted RBP7.96□□□□□ -1.14
TRAF4-213ENST00000578917 MAP3K11Q16584 847 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 SLC9C2Q5TAH2 1124 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 ZFPM1Q8IX07 1006 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 MAGEB6Q8N7X4 407 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 ZKSCAN4Q969J2 545 aaPredicted RBP7.96□□□□□ -1.14
TRAF4-213ENST00000578917 IDI2Q9BXS1 227 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.96□□□□□ -1.14
TRAF4-213ENST00000578917 BOLA2Q9H3K6 86 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 DCTPP1Q9H773 170 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 PCDHB15Q9Y5E8 787 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 GAKO14976 1311 aa7.96□□□□□ -1.14
TRAF4-213ENST00000578917 MANSC4A6NHS7 340 aaPredicted RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 IGSF3O75054 1194 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 ZBTB48P10074 688 aaPredicted RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 HSPA8P11142 646 aaKnown RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 ATP5JP18859 108 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 USP5P45974 858 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 AAMPQ13685 434 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 VGLL4Q14135 290 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 ANKRD45Q5TZF3 282 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 CRACR2BQ8N4Y2 399 aaPredicted RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 MIGA1Q8NAN2 632 aa7.95□□□□□ -1.14
TRAF4-213ENST00000578917 SH3RF3Q8TEJ3 882 aaPredicted RBP7.95□□□□□ -1.14
TRAF4-213ENST00000578917 TGFBRAP1Q8WUH2 860 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms