RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 RUFY3Q7L099 469 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 CNBD1Q8NA66 436 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 SPATA5Q8NB90 893 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
RTTN-202ENST00000578780 TAF6LQ9Y6J9 622 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 EP400Q96L91 3159 aa11.71□□□□□ -0.53
RTTN-202ENST00000578780 HMGB2P26583 209 aaKnown RBP11.71□□□□□ -0.54
RTTN-202ENST00000578780 ZSCAN25Q6NSZ9 544 aa11.71□□□□□ -0.54
RTTN-202ENST00000578780 CEP120Q8N960 986 aa11.71□□□□□ -0.54
RTTN-202ENST00000578780 APPBP2Q92624 585 aa11.71□□□□□ -0.54
RTTN-202ENST00000578780 DSCC1Q9BVC3 393 aa11.71□□□□□ -0.54
RTTN-202ENST00000578780 ARAP2Q8WZ64 1704 aa11.71□□□□□ -0.54
RTTN-202ENST00000578780 RPAP1Q9BWH6 1393 aaPredicted RBP11.71□□□□□ -0.54
RTTN-202ENST00000578780 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
RTTN-202ENST00000578780 IDH1O75874 414 aaKnown RBP11.7□□□□□ -0.54
RTTN-202ENST00000578780 HSPD1P10809 573 aaKnown RBP11.7□□□□□ -0.54
RTTN-202ENST00000578780 RASGRF1Q13972 1273 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 NEK11Q8NG66 645 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 LARP6Q9BRS8 491 aaKnown RBP11.7□□□□□ -0.54
RTTN-202ENST00000578780 DONSONQ9NYP3 566 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 JRKLQ9Y4A0 524 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 UBR3Q6ZT12 1888 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 PLSCR1O15162 318 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 CYP21A2P08686 494 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 TM4SF1P30408 202 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 ADD2P35612 726 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 UBE4AQ14139 1066 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 KRT32Q14532 448 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 BLOC1S2Q6QNY1 142 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 PUS7LQ9H0K6 701 aaKnown RBP11.7□□□□□ -0.54
RTTN-202ENST00000578780 LIMCH1Q9UPQ0 1083 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
RTTN-202ENST00000578780 TAF1P21675 1872 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 WTIPA6NIX2 430 aaPredicted RBP11.69□□□□□ -0.54
RTTN-202ENST00000578780 IRF6O14896 467 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 AP5Z1O43299 807 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 KDM4AO75164 1064 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 PRR5LQ6MZQ0 368 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 INTS4Q96HW7 963 aaKnown RBP11.69□□□□□ -0.54
RTTN-202ENST00000578780 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 CASZ1Q86V15 1759 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 GOLGA6L6A8MZA4 724 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 COL9A3Q14050 684 aaPredicted RBP11.69□□□□□ -0.54
RTTN-202ENST00000578780 DNAJC21Q5F1R6 531 aaKnown RBP11.69□□□□□ -0.54
RTTN-202ENST00000578780 KRBA2Q6ZNG9 492 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
RTTN-202ENST00000578780 SERPINB2P05120 415 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 RPS6KB1P23443 525 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 GYG1P46976 350 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 SART3Q15020 963 aaKnown RBP11.68□□□□□ -0.54
RTTN-202ENST00000578780 TFCP2L1Q9NZI6 479 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 PAXBP1Q9Y5B6 917 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 ZNF532Q9HCE3 1301 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 PDE6AP16499 860 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 WWC3Q9ULE0 1092 aa11.68□□□□□ -0.54
RTTN-202ENST00000578780 TNRC6CQ9HCJ0 1690 aaKnown RBP11.67□□□□□ -0.54
RTTN-202ENST00000578780 GPAA1O43292 621 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 TPM3P06753 285 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 ST5P78524 1137 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 MAP3K12Q12852 859 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 ZNF827Q17R98 1081 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 C16orf45Q96MC5 204 aaPredicted RBP11.67□□□□□ -0.54
RTTN-202ENST00000578780 TCEANC2Q96MN5 208 aa11.67□□□□□ -0.54
RTTN-202ENST00000578780 GNL3LQ9NVN8 582 aaKnown RBP11.67□□□□□ -0.54
RTTN-202ENST00000578780 IQSEC3Q9UPP2 1182 aaPredicted RBP11.67□□□□□ -0.54
RTTN-202ENST00000578780 TNNT1P13805 278 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 TXLNBQ8N3L3 684 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 GTF3C6Q969F1 213 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 ZSCAN31Q96LW9 406 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 CXorf56Q9H5V9 222 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 RGS17Q9UGC6 210 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 ZNF804BA4D1E1 1349 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 A0A0G2JLW4 131 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 FOXP2O15409 715 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 ATP2B1P20020 1258 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 GSCP56915 257 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 DDR1Q08345 913 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 GRAPQ13588 217 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 ANKRD1Q15327 319 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 TTLL5Q6EMB2 1281 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 STOX1Q6ZVD7 989 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 GRAPLQ8TC17 118 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
RTTN-202ENST00000578780 FAM84BQ96KN1 310 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.66□□□□□ -0.54
RTTN-202ENST00000578780 V9GYY5 206 aaPredicted RBP11.66□□□□□ -0.54
RTTN-202ENST00000578780 CCDC189A1A4V9 331 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 LARGE1O95461 756 aa11.65□□□□□ -0.54
RTTN-202ENST00000578780 BMS1Q14692 1282 aaKnown RBP11.65□□□□□ -0.54
RTTN-202ENST00000578780 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms