RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ELP3Q9H9T3 547 aa19.09■□□□□ 0.65
SF3B3-215ENST00000577085 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
SF3B3-215ENST00000577085 ZBTB22O15209 634 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 ALDH1A1P00352 501 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 UQCRFS1P1P0C7P4 283 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 TCP10Q12799 353 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 CCDC158Q5M9N0 1113 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 CDC42EP5Q6NZY7 148 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 SPATA5Q8NB90 893 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 RCAN3Q9UKA8 241 aa19.08■□□□□ 0.64
SF3B3-215ENST00000577085 TBC1D8O95759 1140 aa19.07■□□□□ 0.64
SF3B3-215ENST00000577085 MAP3K9P80192 1104 aa19.07■□□□□ 0.64
SF3B3-215ENST00000577085 TTC39AQ5SRH9 613 aa19.07■□□□□ 0.64
SF3B3-215ENST00000577085 OTUD7BQ6GQQ9 843 aa19.07■□□□□ 0.64
SF3B3-215ENST00000577085 OPTNQ96CV9 577 aa19.07■□□□□ 0.64
SF3B3-215ENST00000577085 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.07■□□□□ 0.64
SF3B3-215ENST00000577085 GSTO1P78417 241 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 FAM151AQ8WW52 585 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 WRNIP1Q96S55 665 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 MCOLN1Q9GZU1 580 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 CHMP4BQ9H444 224 aaKnown RBP19.06■□□□□ 0.64
SF3B3-215ENST00000577085 GPR108Q9NPR9 543 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 HMG20BQ9P0W2 317 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
SF3B3-215ENST00000577085 ARID4AP29374 1257 aaPredicted RBP19.05■□□□□ 0.64
SF3B3-215ENST00000577085 VGLL4Q14135 290 aa19.05■□□□□ 0.64
SF3B3-215ENST00000577085 IFNL1Q8IU54 200 aa19.05■□□□□ 0.64
SF3B3-215ENST00000577085 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.05■□□□□ 0.645e-6■□□□□ 10.2
SF3B3-215ENST00000577085 RAI14Q9P0K7 980 aa19.05■□□□□ 0.64
SF3B3-215ENST00000577085 LRP2BPQ9P2M1 347 aa19.05■□□□□ 0.64
SF3B3-215ENST00000577085 DDX19BQ9UMR2 479 aa19.05■□□□□ 0.64
SF3B3-215ENST00000577085 RPAP1Q9BWH6 1393 aaPredicted RBP19.05■□□□□ 0.64
SF3B3-215ENST00000577085 CASP8AP2Q9UKL3 1982 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 CCDC85CA6NKD9 419 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 MECOMQ03112 1051 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 CEP85Q6P2H3 762 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
SF3B3-215ENST00000577085 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.04■□□□□ 0.64
SF3B3-215ENST00000577085 ZNF341Q9BYN7 854 aa19.04■□□□□ 0.64
SF3B3-215ENST00000577085 LDHCP07864 332 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 BTDP43251 543 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 NFIAQ12857 509 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 PI16Q6UXB8 463 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 ERC1Q8IUD2 1116 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 ZSCAN29Q8IWY8 852 aaPredicted RBP19.03■□□□□ 0.64
SF3B3-215ENST00000577085 OTUD5Q96G74 571 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 NOL10Q9BSC4 688 aaKnown RBP19.03■□□□□ 0.64
SF3B3-215ENST00000577085 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
SF3B3-215ENST00000577085 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
SF3B3-215ENST00000577085 MROH7-TTC4A0A0A0MT08 1334 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 GAKO14976 1311 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 MCAMP43121 646 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 HSP90AB4PQ58FF6 505 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 TBC1D9Q6ZT07 1266 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 DBNDD2Q9BQY9 259 aa19.02■□□□□ 0.64
SF3B3-215ENST00000577085 GPR25O00155 361 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 HMMRO75330 724 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 GJA5P36382 358 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 RGS3P49796 1198 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 GTF2A2P52657 109 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 PICALMQ13492 652 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 CTU1Q7Z7A3 348 aaKnown RBP19.01■□□□□ 0.63
SF3B3-215ENST00000577085 ZNF296Q8WUU4 475 aaPredicted RBP19.01■□□□□ 0.63
SF3B3-215ENST00000577085 ZKSCAN4Q969J2 545 aaPredicted RBP19.01■□□□□ 0.63
SF3B3-215ENST00000577085 FAM163AQ96GL9 167 aaPredicted RBP19.01■□□□□ 0.63
SF3B3-215ENST00000577085 SNRKQ9NRH2 765 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 FAM198AQ9UFP1 575 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 EXOC6BQ9Y2D4 811 aa19.01■□□□□ 0.63
SF3B3-215ENST00000577085 ENTPD3O75355 529 aa19■□□□□ 0.63
SF3B3-215ENST00000577085 WDHD1O75717 1129 aaPredicted RBP19■□□□□ 0.63
SF3B3-215ENST00000577085 ERO1BQ86YB8 467 aa19■□□□□ 0.63
SF3B3-215ENST00000577085 IDI2Q9BXS1 227 aa19■□□□□ 0.63
SF3B3-215ENST00000577085 OTOFQ9HC10 1997 aa19■□□□□ 0.63
SF3B3-215ENST00000577085 MYH2Q9UKX2 1941 aa19■□□□□ 0.63
SF3B3-215ENST00000577085 CCL15-CCL14A0A0B4J2E2 113 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 SPDYE5A6NIY4 337 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 IGF2BP3O00425 579 aaKnown RBP eCLIP18.99■□□□□ 0.63
SF3B3-215ENST00000577085 FKTNO75072 461 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 CCL15Q16663 113 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 NOM1Q5C9Z4 860 aaKnown RBP18.99■□□□□ 0.63
SF3B3-215ENST00000577085 RPAP2Q8IXW5 612 aaPredicted RBP18.99■□□□□ 0.63
SF3B3-215ENST00000577085 CNKSR2Q8WXI2 1034 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 NSUN4Q96CB9 384 aaKnown RBP18.99■□□□□ 0.63
SF3B3-215ENST00000577085 CFHR5Q9BXR6 569 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 CCDC8Q9H0W5 538 aaPredicted RBP18.99■□□□□ 0.63
SF3B3-215ENST00000577085 SNCAIPQ9Y6H5 919 aa18.99■□□□□ 0.63
SF3B3-215ENST00000577085 AK9Q5TCS8 1911 aa18.98■□□□□ 0.63
SF3B3-215ENST00000577085 GPR75-ASB3A0A0A6YYF3 556 aa18.98■□□□□ 0.63
SF3B3-215ENST00000577085 NAA16Q6N069 864 aaPredicted RBP18.98■□□□□ 0.63
SF3B3-215ENST00000577085 DBNLQ9UJU6 430 aaKnown RBP18.98■□□□□ 0.63
SF3B3-215ENST00000577085 APBB1O00213 710 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 BAG3O95817 575 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 MAP4K4O95819 1239 aaPredicted RBP18.97■□□□□ 0.63
SF3B3-215ENST00000577085 CETPP11597 493 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 SNAPC2Q13487 334 aa18.97■□□□□ 0.63
SF3B3-215ENST00000577085 PKN2Q16513 984 aaKnown RBP18.97■□□□□ 0.63
SF3B3-215ENST00000577085 AACSQ86V21 672 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms