RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 ANGEL1Q9UNK9 670 aaKnown RBP28.75■■■□□ 2.19
SNF8-217ENST00000576353 LDHCP07864 332 aa28.74■■■□□ 2.19
SNF8-217ENST00000576353 IFIT2P09913 472 aaKnown RBP28.74■■■□□ 2.19
SNF8-217ENST00000576353 AIDAQ96BJ3 306 aa28.74■■■□□ 2.19
SNF8-217ENST00000576353 TMEM39BQ9GZU3 492 aa28.74■■■□□ 2.19
SNF8-217ENST00000576353 WBP1LQ9NX94 342 aa28.74■■■□□ 2.19
SNF8-217ENST00000576353 FAM155AB1AL88 458 aaPredicted RBP28.73■■■□□ 2.19
SNF8-217ENST00000576353 IGSF3O75054 1194 aa28.73■■■□□ 2.19
SNF8-217ENST00000576353 MAP3K11Q16584 847 aa28.73■■■□□ 2.19
SNF8-217ENST00000576353 NSUN4Q96CB9 384 aaKnown RBP28.73■■■□□ 2.19
SNF8-217ENST00000576353 TEPSINQ96N21 525 aa28.73■■■□□ 2.19
SNF8-217ENST00000576353 CRBNQ96SW2 442 aa28.73■■■□□ 2.19
SNF8-217ENST00000576353 SLC10A3P09131 477 aa28.72■■■□□ 2.19
SNF8-217ENST00000576353 ZAP70P43403 619 aa28.72■■■□□ 2.19
SNF8-217ENST00000576353 LDLRAD1Q5T700 205 aa28.72■■■□□ 2.19
SNF8-217ENST00000576353 LRRCC1Q9C099 1032 aa28.72■■■□□ 2.19
SNF8-217ENST00000576353 MROH7-TTC4A0A0A0MT08 1334 aa28.71■■■□□ 2.19
SNF8-217ENST00000576353 UNCXA6NJT0 531 aa28.71■■■□□ 2.19
SNF8-217ENST00000576353 CYP2E1P05181 493 aaPredicted RBP28.71■■■□□ 2.19
SNF8-217ENST00000576353 IREB2P48200 963 aaKnown RBP28.71■■■□□ 2.19
SNF8-217ENST00000576353 HOOK2Q96ED9 719 aa28.71■■■□□ 2.19
SNF8-217ENST00000576353 BEGAINQ9BUH8 593 aa28.71■■■□□ 2.19
SNF8-217ENST00000576353 DCTPP1Q9H773 170 aa28.71■■■□□ 2.19
SNF8-217ENST00000576353 PCDHB15Q9Y5E8 787 aa28.7■■■□□ 2.18
SNF8-217ENST00000576353 GPR75-ASB3A0A0A6YYF3 556 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 BTDP43251 543 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 RASAL3Q86YV0 1011 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 ZNF384Q8TF68 577 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 FAM151AQ8WW52 585 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 BCL11AQ9H165 835 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 SSC5DA1L4H1 1573 aa28.69■■■□□ 2.18
SNF8-217ENST00000576353 USP2O75604 605 aaPredicted RBP28.68■■■□□ 2.18
SNF8-217ENST00000576353 FZD1Q9UP38 647 aa28.68■■■□□ 2.18
SNF8-217ENST00000576353 MAP4K4O95819 1239 aaPredicted RBP28.67■■■□□ 2.18
SNF8-217ENST00000576353 KIF23Q02241 960 aaPredicted RBP28.67■■■□□ 2.18
SNF8-217ENST00000576353 AAMPQ13685 434 aa28.67■■■□□ 2.18
SNF8-217ENST00000576353 CDAN1Q8IWY9 1227 aa28.67■■■□□ 2.18
SNF8-217ENST00000576353 IDI2Q9BXS1 227 aa28.67■■■□□ 2.18
SNF8-217ENST00000576353 PCNTO95613 3336 aa28.67■■■□□ 2.18
SNF8-217ENST00000576353 THSD7BQ9C0I4 1608 aa28.66■■■□□ 2.18
SNF8-217ENST00000576353 TCP10Q12799 353 aa28.66■■■□□ 2.18
SNF8-217ENST00000576353 NFIAQ12857 509 aa28.66■■■□□ 2.18
SNF8-217ENST00000576353 NAA16Q6N069 864 aaPredicted RBP28.66■■■□□ 2.18
SNF8-217ENST00000576353 REM2Q8IYK8 340 aaPredicted RBP28.66■■■□□ 2.18
SNF8-217ENST00000576353 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.66■■■□□ 2.18
SNF8-217ENST00000576353 SLC10A4Q96EP9 437 aa28.66■■■□□ 2.18
SNF8-217ENST00000576353 ZIC5Q96T25 663 aa28.66■■■□□ 2.18
SNF8-217ENST00000576353 PIH1D3Q9NQM4 214 aaKnown RBP28.66■■■□□ 2.18
SNF8-217ENST00000576353 RPAP1Q9BWH6 1393 aaPredicted RBP28.65■■■□□ 2.18
SNF8-217ENST00000576353 ANKRD13AQ8IZ07 590 aa28.65■■■□□ 2.18
SNF8-217ENST00000576353 NOL10Q9BSC4 688 aaKnown RBP28.65■■■□□ 2.18
SNF8-217ENST00000576353 FAM198AQ9UFP1 575 aa28.65■■■□□ 2.18
SNF8-217ENST00000576353 FOXN1O15353 648 aa28.64■■■□□ 2.18
SNF8-217ENST00000576353 ENTPD3O75355 529 aa28.64■■■□□ 2.18
SNF8-217ENST00000576353 CTCFP49711 727 aaPredicted RBP28.64■■■□□ 2.18
SNF8-217ENST00000576353 CA12O43570 354 aa28.63■■■□□ 2.17
SNF8-217ENST00000576353 BAG3O95817 575 aa28.63■■■□□ 2.17
SNF8-217ENST00000576353 TTF1Q15361 905 aaPredicted RBP28.63■■■□□ 2.17
SNF8-217ENST00000576353 DCAF15Q66K64 600 aa28.63■■■□□ 2.17
SNF8-217ENST00000576353 IDH1O75874 414 aaKnown RBP28.62■■■□□ 2.17
SNF8-217ENST00000576353 RGS3P49796 1198 aa28.62■■■□□ 2.17
SNF8-217ENST00000576353 RHBDL3P58872 404 aa28.62■■■□□ 2.17
SNF8-217ENST00000576353 TMED8Q6PL24 325 aaPredicted RBP28.62■■■□□ 2.17
SNF8-217ENST00000576353 SUPT16HQ9Y5B9 1047 aaKnown RBP28.62■■■□□ 2.17
SNF8-217ENST00000576353 MYH2Q9UKX2 1941 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 SMARCA5O60264 1052 aaPredicted RBP28.61■■■□□ 2.17
SNF8-217ENST00000576353 WDHD1O75717 1129 aaPredicted RBP28.61■■■□□ 2.17
SNF8-217ENST00000576353 MAP3K9P80192 1104 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 MAP3K12Q12852 859 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 CLMNQ96JQ2 1002 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 NDUFB9Q9Y6M9 179 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 AKAP11Q9UKA4 1901 aa28.61■■■□□ 2.17
SNF8-217ENST00000576353 NPM3O75607 178 aaKnown RBP28.6■■■□□ 2.17
SNF8-217ENST00000576353 PLCG2P16885 1265 aa28.6■■■□□ 2.17
SNF8-217ENST00000576353 ATP5JP18859 108 aa28.6■■■□□ 2.17
SNF8-217ENST00000576353 CSRNP1Q96S65 589 aa28.6■■■□□ 2.17
SNF8-217ENST00000576353 ANTXR1Q9H6X2 564 aa28.6■■■□□ 2.17
SNF8-217ENST00000576353 SPRYD7Q5W111 196 aa28.59■■■□□ 2.17
SNF8-217ENST00000576353 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.59■■■□□ 2.17
SNF8-217ENST00000576353 CYP7A1P22680 504 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 PPP4CP60510 307 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 PICALMQ13492 652 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 ZSCAN29Q8IWY8 852 aaPredicted RBP28.58■■■□□ 2.17
SNF8-217ENST00000576353 ZFPM1Q8IX07 1006 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.58■■■□□ 2.173e-6■■■■■ 38.3
SNF8-217ENST00000576353 DNAJC2Q99543 621 aaKnown RBP28.58■■■□□ 2.17
SNF8-217ENST00000576353 ZNF341Q9BYN7 854 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 CSADQ9Y600 493 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 RFX7Q2KHR2 1363 aa28.58■■■□□ 2.17
SNF8-217ENST00000576353 ZBTB48P10074 688 aaPredicted RBP28.57■■■□□ 2.16
SNF8-217ENST00000576353 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.57■■■□□ 2.16
SNF8-217ENST00000576353 MIGA2Q7L4E1 593 aa28.57■■■□□ 2.16
SNF8-217ENST00000576353 TEX11Q8IYF3 940 aa28.57■■■□□ 2.16
SNF8-217ENST00000576353 DDX4Q9NQI0 724 aaKnown RBP28.57■■■□□ 2.16
SNF8-217ENST00000576353 AATFQ9NY61 560 aaKnown RBP eCLIP28.57■■■□□ 2.168e-6■■■■□ 21.3
SNF8-217ENST00000576353 MKRN3Q13064 507 aaKnown RBP28.56■■■□□ 2.16
SNF8-217ENST00000576353 HDAC1Q13547 482 aaPredicted RBP28.56■■■□□ 2.16
SNF8-217ENST00000576353 MAGEB6Q8N7X4 407 aa28.56■■■□□ 2.16
SNF8-217ENST00000576353 WNK4Q96J92 1243 aa28.56■■■□□ 2.16
SNF8-217ENST00000576353 BOLA2Q9H3K6 86 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms