RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 PCDHB15Q9Y5E8 787 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 MYH13Q9UKX3 1938 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 ECM29Q5VYK3 1845 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
CIITA-210ENST00000575513 TTLL12Q14166 644 aaPredicted RBP16.59■□□□□ 0.25
CIITA-210ENST00000575513 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
CIITA-210ENST00000575513 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 RAI14Q9P0K7 980 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 SUPT16HQ9Y5B9 1047 aaKnown RBP16.59■□□□□ 0.25
CIITA-210ENST00000575513 MROH7-TTC4A0A0A0MT08 1334 aa16.59■□□□□ 0.25
CIITA-210ENST00000575513 FAM155AB1AL88 458 aaPredicted RBP16.58■□□□□ 0.24
CIITA-210ENST00000575513 UBE2Q2LH0YL09 131 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 APBB1O00213 710 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 ZAP70P43403 619 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 REM2Q8IYK8 340 aaPredicted RBP16.58■□□□□ 0.24
CIITA-210ENST00000575513 ZNF384Q8TF68 577 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 FAM151AQ8WW52 585 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 IDI2Q9BXS1 227 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 TMEM39BQ9GZU3 492 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 WBP1LQ9NX94 342 aa16.58■□□□□ 0.24
CIITA-210ENST00000575513 RPAP1Q9BWH6 1393 aaPredicted RBP16.57■□□□□ 0.24
CIITA-210ENST00000575513 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
CIITA-210ENST00000575513 SLC10A3P09131 477 aa16.57■□□□□ 0.24
CIITA-210ENST00000575513 IREB2P48200 963 aaKnown RBP16.57■□□□□ 0.24
CIITA-210ENST00000575513 ANGEL1Q9UNK9 670 aaKnown RBP16.57■□□□□ 0.24
CIITA-210ENST00000575513 ENTPD3O75355 529 aa16.56■□□□□ 0.24
CIITA-210ENST00000575513 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
CIITA-210ENST00000575513 BTDP43251 543 aa16.56■□□□□ 0.24
CIITA-210ENST00000575513 CACNB3P54284 484 aa16.56■□□□□ 0.24
CIITA-210ENST00000575513 TTF1Q15361 905 aaPredicted RBP16.56■□□□□ 0.24
CIITA-210ENST00000575513 MOB2Q70IA6 237 aa16.56■□□□□ 0.24
CIITA-210ENST00000575513 AOC2O75106 756 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 BAG3O95817 575 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
CIITA-210ENST00000575513 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
CIITA-210ENST00000575513 ATP5JP18859 108 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 PPP4CP60510 307 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 GRM1Q13255 1194 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 HDAC1Q13547 482 aaPredicted RBP16.55■□□□□ 0.24
CIITA-210ENST00000575513 NAA16Q6N069 864 aaPredicted RBP16.55■□□□□ 0.24
CIITA-210ENST00000575513 RASAL3Q86YV0 1011 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 CERS3Q8IU89 383 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 FAM198AQ9UFP1 575 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 SSC5DA1L4H1 1573 aa16.55■□□□□ 0.24
CIITA-210ENST00000575513 CA12O43570 354 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 WDHD1O75717 1129 aaPredicted RBP16.54■□□□□ 0.24
CIITA-210ENST00000575513 PLCG2P16885 1265 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 RHBDL3P58872 404 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 NFIAQ12857 509 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 PRKG1Q13976 671 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 ANKRD13AQ8IZ07 590 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 AIDAQ96BJ3 306 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 BEGAINQ9BUH8 593 aa16.54■□□□□ 0.24
CIITA-210ENST00000575513 PIH1D3Q9NQM4 214 aaKnown RBP16.54■□□□□ 0.24
CIITA-210ENST00000575513 AKAP11Q9UKA4 1901 aa16.53■□□□□ 0.24
CIITA-210ENST00000575513 THSD7BQ9C0I4 1608 aa16.53■□□□□ 0.24
CIITA-210ENST00000575513 DCAF15Q66K64 600 aa16.53■□□□□ 0.24
CIITA-210ENST00000575513 GCC1Q96CN9 775 aa16.53■□□□□ 0.24
CIITA-210ENST00000575513 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
CIITA-210ENST00000575513 NOL10Q9BSC4 688 aaKnown RBP16.53■□□□□ 0.24
CIITA-210ENST00000575513 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.24
CIITA-210ENST00000575513 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
CIITA-210ENST00000575513 RGS3P49796 1198 aa16.52■□□□□ 0.24
CIITA-210ENST00000575513 MAP3K9P80192 1104 aa16.52■□□□□ 0.24
CIITA-210ENST00000575513 KIF23Q02241 960 aaPredicted RBP16.52■□□□□ 0.24
CIITA-210ENST00000575513 TCP10Q12799 353 aa16.52■□□□□ 0.24
CIITA-210ENST00000575513 CDAN1Q8IWY9 1227 aa16.52■□□□□ 0.24
CIITA-210ENST00000575513 SMARCA5O60264 1052 aaPredicted RBP16.51■□□□□ 0.23
CIITA-210ENST00000575513 ZBTB48P10074 688 aaPredicted RBP16.51■□□□□ 0.23
CIITA-210ENST00000575513 MAP3K10Q02779 954 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
CIITA-210ENST00000575513 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 ZIC5Q96T25 663 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 HAUS7Q99871 368 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 ANTXR1Q9H6X2 564 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 FZD1Q9UP38 647 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 MYH2Q9UKX2 1941 aa16.51■□□□□ 0.23
CIITA-210ENST00000575513 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
CIITA-210ENST00000575513 INHBEP58166 350 aa16.5■□□□□ 0.23
CIITA-210ENST00000575513 SPRYD7Q5W111 196 aa16.5■□□□□ 0.23
CIITA-210ENST00000575513 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
CIITA-210ENST00000575513 CSRNP1Q96S65 589 aa16.5■□□□□ 0.23
CIITA-210ENST00000575513 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
CIITA-210ENST00000575513 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
CIITA-210ENST00000575513 FOXN1O15353 648 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 CYP7A1P22680 504 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 TM4SF4P48230 202 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.49■□□□□ 0.23
CIITA-210ENST00000575513 ADGRA1Q86SQ6 560 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 EXOC6Q8TAG9 804 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 BOLA2Q9H3K6 86 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 DDX4Q9NQI0 724 aaKnown RBP16.49■□□□□ 0.23
CIITA-210ENST00000575513 PAG1Q9NWQ8 432 aa16.49■□□□□ 0.23
CIITA-210ENST00000575513 SAGE1Q9NXZ1 904 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms