RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GREB1LQ9C091 1923 aaPredicted RBP10.69□□□□□ -0.7
SMG6-216ENST00000575176 FOXN1O15353 648 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 WDHD1O75717 1129 aaPredicted RBP10.69□□□□□ -0.7
SMG6-216ENST00000575176 MECOMQ03112 1051 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 CDC42EP5Q6NZY7 148 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 SH3BP5LQ7L8J4 393 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 NEUROD6Q96NK8 337 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 IL1RAPL2Q9NP60 686 aa10.69□□□□□ -0.7
SMG6-216ENST00000575176 DDX4Q9NQI0 724 aaKnown RBP10.69□□□□□ -0.7
SMG6-216ENST00000575176 LDHBP07195 334 aaKnown RBP10.68□□□□□ -0.7
SMG6-216ENST00000575176 GJA5P36382 358 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 ZAP70P43403 619 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 RGMBQ6NW40 437 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 FAM83AQ86UY5 434 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 ZFPM1Q8IX07 1006 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.68□□□□□ -0.7
SMG6-216ENST00000575176 CLMNQ96JQ2 1002 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 ANTXR1Q9H6X2 564 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 VEZTQ9HBM0 779 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 SNRKQ9NRH2 765 aa10.68□□□□□ -0.7
SMG6-216ENST00000575176 GNL3LQ9NVN8 582 aaKnown RBP10.68□□□□□ -0.7
SMG6-216ENST00000575176 GPR75-ASB3A0A0A6YYF3 556 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 UBE2Q2LH0YL09 131 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
SMG6-216ENST00000575176 UQCRFS1P1P0C7P4 283 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 AACSQ86V21 672 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 ERC1Q8IUD2 1116 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.67□□□□□ -0.7
SMG6-216ENST00000575176 KIF1BPQ96EK5 621 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 IDI2Q9BXS1 227 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
SMG6-216ENST00000575176 PARP14Q460N5 1801 aa10.66□□□□□ -0.7
SMG6-216ENST00000575176 USP2O75604 605 aaPredicted RBP10.66□□□□□ -0.7
SMG6-216ENST00000575176 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
SMG6-216ENST00000575176 MAP2K2P36507 400 aa10.66□□□□□ -0.7
SMG6-216ENST00000575176 RBM5P52756 815 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG6-216ENST00000575176 OS9Q13438 667 aaPredicted RBP10.66□□□□□ -0.7
SMG6-216ENST00000575176 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.66□□□□□ -0.7
SMG6-216ENST00000575176 ZGPATQ8N5A5 531 aaKnown RBP10.66□□□□□ -0.7
SMG6-216ENST00000575176 C2orf69Q8N8R5 385 aa10.66□□□□□ -0.7
SMG6-216ENST00000575176 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMG6-216ENST00000575176 TCRBV5S4A2TA0A5A2 114 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 MYO1BO43795 1136 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 SMARCA5O60264 1052 aaPredicted RBP10.65□□□□□ -0.7
SMG6-216ENST00000575176 RAB11FIP3O75154 756 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 HMMRO75330 724 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 CHGBP05060 677 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 ECE1P42892 770 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 BTDP43251 543 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 NOGQ13253 232 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 EDC3Q96F86 508 aaKnown RBP10.65□□□□□ -0.7
SMG6-216ENST00000575176 ABCF2Q9UG63 623 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 SNCAIPQ9Y6H5 919 aa10.65□□□□□ -0.7
SMG6-216ENST00000575176 DDTLA6NHG4 134 aaPredicted RBP10.64□□□□□ -0.71
SMG6-216ENST00000575176 NPM3O75607 178 aaKnown RBP10.64□□□□□ -0.71
SMG6-216ENST00000575176 RGS3P49796 1198 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 PRKG1Q13976 671 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 VGLL4Q14135 290 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 HSP90AB4PQ58FF6 505 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 ERICH6Q7L0X2 663 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 DZIP1Q86YF9 867 aaKnown RBP10.64□□□□□ -0.71
SMG6-216ENST00000575176 OTUD7AQ8TE49 926 aaPredicted RBP10.64□□□□□ -0.71
SMG6-216ENST00000575176 FAM151AQ8WW52 585 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 ZNF112Q9UJU3 913 aa10.64□□□□□ -0.71
SMG6-216ENST00000575176 ANGEL1Q9UNK9 670 aaKnown RBP10.64□□□□□ -0.71
SMG6-216ENST00000575176 LAMA4Q16363 1823 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 PHF20L1A8MW92 1017 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 APBB1O00213 710 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 ZNF157P51786 506 aaPredicted RBP10.63□□□□□ -0.71
SMG6-216ENST00000575176 PPP4CP60510 307 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 KIF23Q02241 960 aaPredicted RBP10.63□□□□□ -0.71
SMG6-216ENST00000575176 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 COL13A1Q5TAT6 717 aaPredicted RBP10.63□□□□□ -0.71
SMG6-216ENST00000575176 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 WNK4Q96J92 1243 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 CSRNP1Q96S65 589 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 RIOK1Q9BRS2 568 aaKnown RBP10.63□□□□□ -0.71
SMG6-216ENST00000575176 CHMP4BQ9H444 224 aaKnown RBP10.63□□□□□ -0.71
SMG6-216ENST00000575176 DNAJC18Q9H819 358 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 MGAMO43451 1857 aa10.63□□□□□ -0.71
SMG6-216ENST00000575176 TNRC18O15417 2968 aaPredicted RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 RLFQ13129 1914 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 FLT1P17948 1338 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 A0A0G2JMZ2 1700 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 UNCXA6NJT0 531 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 IGSF3O75054 1194 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 ENTPD3O75355 529 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 ATP5JP18859 108 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 TCP10Q12799 353 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 GRM1Q13255 1194 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 HDAC1Q13547 482 aaPredicted RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 RRP1BQ14684 758 aaKnown RBP10.62□□□□□ -0.71
SMG6-216ENST00000575176 SLFNL1Q499Z3 407 aa10.62□□□□□ -0.71
SMG6-216ENST00000575176 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms