RNA–Protein interactions for RNA: ENST00000574662.1

SMPD3-212, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 3

Gene SMPD3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-212ENST00000574662 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
SMPD3-212ENST00000574662 IGSF3O75054 1194 aa18.99■□□□□ 0.63
SMPD3-212ENST00000574662 DYNLL1P63167 89 aaKnown RBP18.99■□□□□ 0.63
SMPD3-212ENST00000574662 PTH1RQ03431 593 aa18.99■□□□□ 0.63
SMPD3-212ENST00000574662 PANK2Q9BZ23 570 aa18.99■□□□□ 0.63
SMPD3-212ENST00000574662 EIF6P56537 245 aaKnown RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 TNIP1Q15025 636 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 FAM163AQ96GL9 167 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 STRBPQ96SI9 672 aaKnown RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 LSG1Q9H089 658 aaKnown RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 ARMT1Q9H993 441 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 RRAGDQ9NQL2 400 aaPredicted RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 RAD50Q92878 1312 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 PSME4Q14997 1843 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 GPAA1O43292 621 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 MBD4O95243 580 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 BAG4O95429 457 aaKnown RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 GSTO1P78417 241 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 VPS53Q5VIR6 699 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 LCORLQ8N3X6 602 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 RIOK1Q9BRS2 568 aaKnown RBP18.98■□□□□ 0.63
SMPD3-212ENST00000574662 ANO2Q9NQ90 1003 aa18.98■□□□□ 0.63
SMPD3-212ENST00000574662 CCDC171Q6TFL3 1326 aa18.97■□□□□ 0.63
SMPD3-212ENST00000574662 LDHCP07864 332 aa18.97■□□□□ 0.63
SMPD3-212ENST00000574662 PCDHAC2Q9Y5I4 1007 aa18.97■□□□□ 0.63
SMPD3-212ENST00000574662 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
SMPD3-212ENST00000574662 MROH7-TTC4A0A0A0MT08 1334 aa18.97■□□□□ 0.63
SMPD3-212ENST00000574662 MAGEB6P1A0A0J9YX57 407 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 FOXP2O15409 715 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 TMED8Q6PL24 325 aaPredicted RBP18.96■□□□□ 0.63
SMPD3-212ENST00000574662 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 AIDAQ96BJ3 306 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 MRIQ9BWK5 157 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMPD3-212ENST00000574662 DAGLAQ9Y4D2 1042 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 GAKO14976 1311 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 MYO3BQ8WXR4 1341 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
SMPD3-212ENST00000574662 GPR75-ASB3A0A0A6YYF3 556 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 PRKAB2O43741 272 aa18.96■□□□□ 0.63
SMPD3-212ENST00000574662 SHTN1A0MZ66 631 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 HSPD1P10809 573 aaKnown RBP18.95■□□□□ 0.62
SMPD3-212ENST00000574662 CLCN1P35523 988 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 CRKP46108 304 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 PPP4CP60510 307 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 HHIPL2Q6UWX4 724 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 KIAA1211Q6ZU35 1233 aa18.95■□□□□ 0.62
SMPD3-212ENST00000574662 BTDP43251 543 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 GMPSP49915 693 aaPredicted RBP18.94■□□□□ 0.62
SMPD3-212ENST00000574662 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
SMPD3-212ENST00000574662 SLF2Q8IX21 1173 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 TEKT1Q969V4 418 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 MAST2Q6P0Q8 1798 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 MYH2Q9UKX2 1941 aa18.94■□□□□ 0.62
SMPD3-212ENST00000574662 USP17L8P0C7I0 530 aa18.93■□□□□ 0.62
SMPD3-212ENST00000574662 MCCP23508 829 aa18.93■□□□□ 0.62
SMPD3-212ENST00000574662 MCM2P49736 904 aa18.93■□□□□ 0.62
SMPD3-212ENST00000574662 HDLBPQ00341 1268 aaKnown RBP18.93■□□□□ 0.62
SMPD3-212ENST00000574662 SERPINA10Q9UK55 444 aa18.93■□□□□ 0.62
SMPD3-212ENST00000574662 SH3RF3Q8TEJ3 882 aaPredicted RBP18.93■□□□□ 0.62
SMPD3-212ENST00000574662 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
SMPD3-212ENST00000574662 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
SMPD3-212ENST00000574662 GSG1L2A8MUP6 293 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 DDNO94850 711 aaPredicted RBP18.92■□□□□ 0.62
SMPD3-212ENST00000574662 RPS12P25398 132 aaKnown RBP18.92■□□□□ 0.62
SMPD3-212ENST00000574662 RHBDL3P58872 404 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 CFAP100Q494V2 611 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 GPC2Q8N158 579 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 SLC4A4Q9Y6R1 1079 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 ADAMTSL1Q8N6G6 1762 aa18.92■□□□□ 0.62
SMPD3-212ENST00000574662 PATL2C9JE40 543 aaKnown RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 BAG3O95817 575 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 SDR42E1Q8WUS8 393 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 DPF2Q92785 391 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 PRMT6Q96LA8 375 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 DSCC1Q9BVC3 393 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 EPB41L2O43491 1005 aaKnown RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 ANAPC15P60006 121 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 OGFOD1Q8N543 542 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 EPB41L4AQ9HCS5 686 aaPredicted RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 CNOT7Q9UIV1 285 aaKnown RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 HDAC9Q9UKV0 1011 aa18.91■□□□□ 0.62
SMPD3-212ENST00000574662 RBM8AQ9Y5S9 174 aaKnown RBP18.91■□□□□ 0.62
SMPD3-212ENST00000574662 FGAP02671 866 aa18.9■□□□□ 0.62
SMPD3-212ENST00000574662 APPP05067 770 aa18.9■□□□□ 0.62
SMPD3-212ENST00000574662 ZNF280AP59817 542 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-212ENST00000574662 CDC42EP5Q6NZY7 148 aa18.9■□□□□ 0.62
SMPD3-212ENST00000574662 TRIM44Q96DX7 344 aaPredicted RBP18.9■□□□□ 0.62
SMPD3-212ENST00000574662 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
SMPD3-212ENST00000574662 EGFRP00533 1210 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 GNAT2P19087 354 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 CCDC173Q0VFZ6 552 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 NECTIN1Q15223 517 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 GAS2L3Q86XJ1 694 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 MICALL2Q8IY33 904 aa18.89■□□□□ 0.61
SMPD3-212ENST00000574662 IFNL3Q8IZI9 196 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms