RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 EPB41L2O43491 1005 aaKnown RBP25.35■■□□□ 1.65
CXCL16-203ENST00000574412 IGSF3O75054 1194 aa25.35■■□□□ 1.65
CXCL16-203ENST00000574412 SH3RF3Q8TEJ3 882 aaPredicted RBP25.35■■□□□ 1.65
CXCL16-203ENST00000574412 SDR42E1Q8WUS8 393 aa25.35■■□□□ 1.65
CXCL16-203ENST00000574412 RBM8AQ9Y5S9 174 aaKnown RBP25.35■■□□□ 1.65
CXCL16-203ENST00000574412 TMED8Q6PL24 325 aaPredicted RBP25.34■■□□□ 1.65
CXCL16-203ENST00000574412 AGBL3Q8NEM8 1001 aa25.34■■□□□ 1.65
CXCL16-203ENST00000574412 MAP4K1Q92918 833 aa25.34■■□□□ 1.65
CXCL16-203ENST00000574412 FAM163AQ96GL9 167 aaPredicted RBP25.34■■□□□ 1.65
CXCL16-203ENST00000574412 GPR75-ASB3A0A0A6YYF3 556 aa25.33■■□□□ 1.65
CXCL16-203ENST00000574412 BAG3O95817 575 aa25.33■■□□□ 1.65
CXCL16-203ENST00000574412 GMPSP49915 693 aaPredicted RBP25.33■■□□□ 1.65
CXCL16-203ENST00000574412 ECM29Q5VYK3 1845 aa25.33■■□□□ 1.65
CXCL16-203ENST00000574412 USP17L8P0C7I0 530 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 HHIPL2Q6UWX4 724 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 DSCC1Q9BVC3 393 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 CFAP100Q494V2 611 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 OGFOD1Q8N543 542 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 EPB41L4AQ9HCS5 686 aaPredicted RBP25.32■■□□□ 1.64
CXCL16-203ENST00000574412 SERPINA10Q9UK55 444 aa25.32■■□□□ 1.64
CXCL16-203ENST00000574412 GSG1L2A8MUP6 293 aa25.31■■□□□ 1.64
CXCL16-203ENST00000574412 CRNKL1Q9BZJ0 848 aaKnown RBP25.31■■□□□ 1.64
CXCL16-203ENST00000574412 HDAC9Q9UKV0 1011 aa25.31■■□□□ 1.64
CXCL16-203ENST00000574412 PALD1Q9ULE6 856 aa25.31■■□□□ 1.64
CXCL16-203ENST00000574412 PATL2C9JE40 543 aaKnown RBP25.3■■□□□ 1.64
CXCL16-203ENST00000574412 GNAT2P19087 354 aa25.3■■□□□ 1.64
CXCL16-203ENST00000574412 PPP4CP60510 307 aa25.3■■□□□ 1.64
CXCL16-203ENST00000574412 APOBEC3HQ6NTF7 200 aaKnown RBP25.3■■□□□ 1.64
CXCL16-203ENST00000574412 ZDHHC15Q96MV8 337 aa25.3■■□□□ 1.64
CXCL16-203ENST00000574412 FGAP02671 866 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 MCCP23508 829 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 RHBDL3P58872 404 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 HDLBPQ00341 1268 aaKnown RBP25.29■■□□□ 1.64
CXCL16-203ENST00000574412 TEX11Q8IYF3 940 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 U3KPZ7 1027 aaPredicted RBP25.29■■□□□ 1.64
CXCL16-203ENST00000574412 NAV1Q8NEY1 1877 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 DDNO94850 711 aaPredicted RBP25.29■■□□□ 1.64
CXCL16-203ENST00000574412 IFNL3Q8IZI9 196 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 USP40Q9NVE5 1235 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 FOCADQ5VW36 1801 aa25.29■■□□□ 1.64
CXCL16-203ENST00000574412 RPS12P25398 132 aaKnown RBP25.28■■□□□ 1.64
CXCL16-203ENST00000574412 HSPA4P34932 840 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 TDO2P48775 406 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 MICALL2Q8IY33 904 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 GPC2Q8N158 579 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 TGFBRAP1Q8WUH2 860 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 MRIQ9BWK5 157 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 TAF6LQ9Y6J9 622 aa25.28■■□□□ 1.64
CXCL16-203ENST00000574412 USP5P45974 858 aa25.27■■□□□ 1.64
CXCL16-203ENST00000574412 NECTIN1Q15223 517 aa25.27■■□□□ 1.64
CXCL16-203ENST00000574412 RBM26Q5T8P6 1007 aaKnown RBP25.27■■□□□ 1.64
CXCL16-203ENST00000574412 CREB3L3Q68CJ9 461 aa25.27■■□□□ 1.64
CXCL16-203ENST00000574412 CDC42EP5Q6NZY7 148 aa25.27■■□□□ 1.64
CXCL16-203ENST00000574412 PRMT6Q96LA8 375 aaPredicted RBP25.27■■□□□ 1.64
CXCL16-203ENST00000574412 NAPBQ9H115 298 aa25.27■■□□□ 1.64
CXCL16-203ENST00000574412 SLC27A2O14975 620 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 PLCG2P16885 1265 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 CACNB3P54284 484 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 HAND2P61296 217 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 DLGAP5Q15398 846 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 MAPKAPK5Q8IW41 473 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 TDRD3Q9H7E2 651 aaKnown RBP25.26■■□□□ 1.63
CXCL16-203ENST00000574412 CNOT7Q9UIV1 285 aaKnown RBP25.26■■□□□ 1.63
CXCL16-203ENST00000574412 EGFRP00533 1210 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 SLC4A8Q2Y0W8 1093 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 RASEFQ8IZ41 740 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 NACAP1Q9BZK3 213 aa25.26■■□□□ 1.63
CXCL16-203ENST00000574412 LAMA4Q16363 1823 aa25.25■■□□□ 1.63
CXCL16-203ENST00000574412 PICALMQ13492 652 aa25.25■■□□□ 1.63
CXCL16-203ENST00000574412 DPF2Q92785 391 aa25.25■■□□□ 1.63
CXCL16-203ENST00000574412 MYOZ2Q9NPC6 264 aa25.25■■□□□ 1.63
CXCL16-203ENST00000574412 DCP1AQ9NPI6 582 aaPredicted RBP25.25■■□□□ 1.63
CXCL16-203ENST00000574412 MYH1P12882 1939 aa25.25■■□□□ 1.63
CXCL16-203ENST00000574412 SPDYE2BA6NHP3 402 aa25.24■■□□□ 1.63
CXCL16-203ENST00000574412 CYP21A2P08686 494 aa25.24■■□□□ 1.63
CXCL16-203ENST00000574412 SPDYE6P0CI01 402 aa25.24■■□□□ 1.63
CXCL16-203ENST00000574412 BECN1Q14457 450 aa25.24■■□□□ 1.63
CXCL16-203ENST00000574412 SAMD7Q7Z3H4 446 aa25.24■■□□□ 1.63
CXCL16-203ENST00000574412 ANAPC15P60006 121 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 RABEP1Q15276 862 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 TBC1D10BQ4KMP7 808 aaPredicted RBP25.23■■□□□ 1.63
CXCL16-203ENST00000574412 CERS3Q8IU89 383 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
CXCL16-203ENST00000574412 CTNNA3Q9UI47 895 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 SNX14Q9Y5W7 946 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 LAMB1P07942 1786 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 CYP2D7A0A087X1C5 515 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 CLRN2A0PK11 232 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 WDHD1O75717 1129 aaPredicted RBP25.23■■□□□ 1.63
CXCL16-203ENST00000574412 SLC4A3P48751 1232 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 ZNF280AP59817 542 aaPredicted RBP25.23■■□□□ 1.63
CXCL16-203ENST00000574412 ALX1Q15699 326 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 STK11IPQ8N1F8 1099 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 TBC1D2Q9BYX2 928 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 ATP8A2Q9NTI2 1148 aa25.23■■□□□ 1.63
CXCL16-203ENST00000574412 RPAP1Q9BWH6 1393 aaPredicted RBP25.22■■□□□ 1.63
CXCL16-203ENST00000574412 FLT1P17948 1338 aa25.22■■□□□ 1.63
CXCL16-203ENST00000574412 MINDY4BA8MYZ0 360 aa25.22■■□□□ 1.63
CXCL16-203ENST00000574412 SMIM22K7EJ46 135 aa25.22■■□□□ 1.63
CXCL16-203ENST00000574412 EVX2Q03828 476 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms