RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ANGEL1Q9UNK9 670 aaKnown RBP34.03■■■■□ 3.04
SCARF1-207ENST00000573867 CYP2E1P05181 493 aaPredicted RBP34.02■■■■□ 3.04
SCARF1-207ENST00000573867 ZAP70P43403 619 aa34.02■■■■□ 3.04
SCARF1-207ENST00000573867 LDLRAD1Q5T700 205 aa34.02■■■■□ 3.04
SCARF1-207ENST00000573867 FKBP1CQ5VVH2 108 aa34.02■■■■□ 3.04
SCARF1-207ENST00000573867 FAM163AQ96GL9 167 aaPredicted RBP34.02■■■■□ 3.04
SCARF1-207ENST00000573867 TNNI2P48788 182 aa34.01■■■■□ 3.03
SCARF1-207ENST00000573867 NFIAQ12857 509 aa34.01■■■■□ 3.03
SCARF1-207ENST00000573867 SUPT20HL1Q3ZLR7 823 aa34.01■■■■□ 3.03
SCARF1-207ENST00000573867 ARMC9Q7Z3E5 817 aa34.01■■■■□ 3.03
SCARF1-207ENST00000573867 NSUN4Q96CB9 384 aaKnown RBP34.01■■■■□ 3.03
SCARF1-207ENST00000573867 TMOD2Q9NZR1 351 aa34.01■■■■□ 3.03
SCARF1-207ENST00000573867 FOXN1O15353 648 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 NOGQ13253 232 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 MAP3K11Q16584 847 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 FAM83AQ86UY5 434 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 CCDC102AQ96A19 550 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 USP40Q9NVE5 1235 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 NDUFB9Q9Y6M9 179 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 MROH7-TTC4A0A0A0MT08 1334 aa34■■■■□ 3.03
SCARF1-207ENST00000573867 CLASRPQ8N2M8 674 aaKnown RBP33.99■■■■□ 3.03
SCARF1-207ENST00000573867 PIH1D3Q9NQM4 214 aaKnown RBP33.99■■■■□ 3.03
SCARF1-207ENST00000573867 USP2O75604 605 aaPredicted RBP33.98■■■■□ 3.03
SCARF1-207ENST00000573867 MAP2K1Q02750 393 aaPredicted RBP33.98■■■■□ 3.03
SCARF1-207ENST00000573867 BCL11AQ9H165 835 aa33.98■■■■□ 3.03
SCARF1-207ENST00000573867 RAI14Q9P0K7 980 aa33.98■■■■□ 3.03
SCARF1-207ENST00000573867 FAM198AQ9UFP1 575 aa33.98■■■■□ 3.03
SCARF1-207ENST00000573867 RFX7Q2KHR2 1363 aa33.98■■■■□ 3.03
SCARF1-207ENST00000573867 LRP2BPQ9P2M1 347 aa33.97■■■■□ 3.03
SCARF1-207ENST00000573867 PPP1R12BO60237 982 aaPredicted RBP33.96■■■■□ 3.03
SCARF1-207ENST00000573867 BTDP43251 543 aa33.96■■■■□ 3.03
SCARF1-207ENST00000573867 KIF23Q02241 960 aaPredicted RBP33.96■■■■□ 3.03
SCARF1-207ENST00000573867 CLMNQ96JQ2 1002 aa33.96■■■■□ 3.03
SCARF1-207ENST00000573867 MYO5AQ9Y4I1 1855 aaKnown RBP33.95■■■■□ 3.03
SCARF1-207ENST00000573867 SMARCA5O60264 1052 aaPredicted RBP33.95■■■■□ 3.03
SCARF1-207ENST00000573867 ZFPM1Q8IX07 1006 aa33.95■■■■□ 3.03
SCARF1-207ENST00000573867 SLF2Q8IX21 1173 aa33.95■■■■□ 3.03
SCARF1-207ENST00000573867 DCTPP1Q9H773 170 aa33.95■■■■□ 3.03
SCARF1-207ENST00000573867 RPAP1Q9BWH6 1393 aaPredicted RBP33.95■■■■□ 3.02
SCARF1-207ENST00000573867 MAST2Q6P0Q8 1798 aa33.95■■■■□ 3.02
SCARF1-207ENST00000573867 GPR75-ASB3A0A0A6YYF3 556 aa33.94■■■■□ 3.02
SCARF1-207ENST00000573867 RHBDL3P58872 404 aa33.94■■■■□ 3.02
SCARF1-207ENST00000573867 TCP10Q12799 353 aa33.94■■■■□ 3.02
SCARF1-207ENST00000573867 FAM151AQ8WW52 585 aa33.93■■■■□ 3.02
SCARF1-207ENST00000573867 ANTXR1Q9H6X2 564 aa33.93■■■■□ 3.02
SCARF1-207ENST00000573867 OTOFQ9HC10 1997 aa33.92■■■■□ 3.02
SCARF1-207ENST00000573867 WDHD1O75717 1129 aaPredicted RBP33.92■■■■□ 3.02
SCARF1-207ENST00000573867 IFIT2P09913 472 aaKnown RBP33.92■■■■□ 3.02
SCARF1-207ENST00000573867 AIDAQ96BJ3 306 aa33.92■■■■□ 3.02
SCARF1-207ENST00000573867 LRRCC1Q9C099 1032 aa33.92■■■■□ 3.02
SCARF1-207ENST00000573867 GSTO1P78417 241 aa33.91■■■■□ 3.02
SCARF1-207ENST00000573867 IDI2Q9BXS1 227 aa33.91■■■■□ 3.02
SCARF1-207ENST00000573867 DDX4Q9NQI0 724 aaKnown RBP33.91■■■■□ 3.02
SCARF1-207ENST00000573867 IREB2P48200 963 aaKnown RBP33.9■■■■□ 3.02
SCARF1-207ENST00000573867 RGS3P49796 1198 aa33.9■■■■□ 3.02
SCARF1-207ENST00000573867 ADGRA1Q86SQ6 560 aa33.9■■■■□ 3.02
SCARF1-207ENST00000573867 LDHCP07864 332 aa33.89■■■■□ 3.02
SCARF1-207ENST00000573867 MKRN3Q13064 507 aaKnown RBP33.89■■■■□ 3.02
SCARF1-207ENST00000573867 CSRNP1Q96S65 589 aa33.89■■■■□ 3.02
SCARF1-207ENST00000573867 ZBTB4Q9P1Z0 1013 aaPredicted RBP33.89■■■■□ 3.02
SCARF1-207ENST00000573867 HSPA8P11142 646 aaKnown RBP33.88■■■■□ 3.01
SCARF1-207ENST00000573867 NAA16Q6N069 864 aaPredicted RBP33.88■■■■□ 3.01
SCARF1-207ENST00000573867 PPP1R3FQ6ZSY5 799 aaPredicted RBP33.87■■■■□ 3.01
SCARF1-207ENST00000573867 SH3BP5LQ7L8J4 393 aa33.87■■■■□ 3.01
SCARF1-207ENST00000573867 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.87■■■■□ 3.01
SCARF1-207ENST00000573867 DOCK2Q92608 1830 aa33.86■■■■□ 3.01
SCARF1-207ENST00000573867 CTCFP49711 727 aaPredicted RBP33.86■■■■□ 3.01
SCARF1-207ENST00000573867 SPRYD7Q5W111 196 aa33.86■■■■□ 3.01
SCARF1-207ENST00000573867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.86■■■■□ 3.01
SCARF1-207ENST00000573867 SLC10A4Q96EP9 437 aa33.86■■■■□ 3.01
SCARF1-207ENST00000573867 TSKSQ9UJT2 592 aa33.86■■■■□ 3.01
SCARF1-207ENST00000573867 SUPT16HQ9Y5B9 1047 aaKnown RBP33.86■■■■□ 3.01
SCARF1-207ENST00000573867 ENTPD3O75355 529 aa33.85■■■■□ 3.01
SCARF1-207ENST00000573867 IDH1O75874 414 aaKnown RBP33.85■■■■□ 3.01
SCARF1-207ENST00000573867 COL13A1Q5TAT6 717 aaPredicted RBP33.85■■■■□ 3.01
SCARF1-207ENST00000573867 ANKRD13AQ8IZ07 590 aa33.85■■■■□ 3.01
SCARF1-207ENST00000573867 ATRNL1Q5VV63 1379 aa33.85■■■■□ 3.01
SCARF1-207ENST00000573867 UNCXA6NJT0 531 aa33.84■■■■□ 3.01
SCARF1-207ENST00000573867 GJA5P36382 358 aa33.84■■■■□ 3.01
SCARF1-207ENST00000573867 PICALMQ13492 652 aa33.84■■■■□ 3.01
SCARF1-207ENST00000573867 MIGA2Q7L4E1 593 aa33.84■■■■□ 3.01
SCARF1-207ENST00000573867 EDC3Q96F86 508 aaKnown RBP33.84■■■■□ 3.01
SCARF1-207ENST00000573867 LBX1P52954 281 aa33.83■■■■□ 3.01
SCARF1-207ENST00000573867 SH3RF3Q8TEJ3 882 aaPredicted RBP33.83■■■■□ 3.01
SCARF1-207ENST00000573867 WNK4Q96J92 1243 aa33.83■■■■□ 3.01
SCARF1-207ENST00000573867 BEGAINQ9BUH8 593 aa33.83■■■■□ 3.01
SCARF1-207ENST00000573867 AATFQ9NY61 560 aaKnown RBP eCLIP33.83■■■■□ 3.01
SCARF1-207ENST00000573867 VGLL4Q14135 290 aa33.82■■■■□ 3
SCARF1-207ENST00000573867 DNAJC2Q99543 621 aaKnown RBP33.82■■■■□ 3
SCARF1-207ENST00000573867 ELP3Q9H9T3 547 aa33.82■■■■□ 3
SCARF1-207ENST00000573867 DDTLA6NHG4 134 aaPredicted RBP33.81■■■■□ 3
SCARF1-207ENST00000573867 SLURP2P0DP57 97 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 ATP5JP18859 108 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 PPP4CP60510 307 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 MAP3K9P80192 1104 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 EXOC6Q8TAG9 804 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 CNKSR2Q8WXI2 1034 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 BOLA2Q9H3K6 86 aa33.81■■■■□ 3
SCARF1-207ENST00000573867 GOLIM4O00461 696 aa33.8■■■■□ 3
SCARF1-207ENST00000573867 IGSF3O75054 1194 aa33.8■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms