RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 ABCF2Q9UG63 623 aa11.93□□□□□ -0.5
NPLOC4-212ENST00000573328 SALL1Q9NSC2 1324 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 PNMA6EA0A0J9YXQ4 647 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 GPR25O00155 361 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 FKTNO75072 461 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 GJA5P36382 358 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 TCP10Q12799 353 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 RASGRF1Q13972 1273 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 VGLL4Q14135 290 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 FKBP1CQ5VVH2 108 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 DCAF15Q66K64 600 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 OTUD5Q96G74 571 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 WRNIP1Q96S55 665 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 C1orf115Q9H7X2 142 aa11.92□□□□□ -0.5
NPLOC4-212ENST00000573328 ATAD5Q96QE3 1844 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 IGF2BP3O00425 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 SPTY2D1Q68D10 685 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 CDC42EP5Q6NZY7 148 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 USP40Q9NVE5 1235 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 DOCK1Q14185 1865 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
NPLOC4-212ENST00000573328 ERICH6Q7L0X2 663 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 MIGA2Q7L4E1 593 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 FAM151AQ8WW52 585 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 CNKSR2Q8WXI2 1034 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 ZNF341Q9BYN7 854 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
NPLOC4-212ENST00000573328 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 CCL15-CCL14A0A0B4J2E2 113 aa11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 GTF2A2P52657 109 aa11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 NFIAQ12857 509 aa11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 PKN2Q16513 984 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 CCL15Q16663 113 aa11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 NOM1Q5C9Z4 860 aaKnown RBP11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 ZSCAN29Q8IWY8 852 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 CFHR5Q9BXR6 569 aa11.89□□□□□ -0.51
NPLOC4-212ENST00000573328 MROH7-TTC4A0A0A0MT08 1334 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 FOCADQ5VW36 1801 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 PTPRFP10586 1907 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 SURF6O75683 361 aaKnown RBP11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 RLBP1P12271 317 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 BTDP43251 543 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 SOX10P56693 466 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 MLLT1Q03111 559 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 CRHR2Q13324 411 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 TAF1CQ15572 869 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 TTC39AQ5SRH9 613 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 PI16Q6UXB8 463 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 ERO1BQ86YB8 467 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 RAI14Q9P0K7 980 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 SNCAIPQ9Y6H5 919 aa11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
NPLOC4-212ENST00000573328 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 UQCRFS1P1P0C7P4 283 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 INPP5BP32019 993 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 RGS3P49796 1198 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 ATP8B2P98198 1209 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 MECOMQ03112 1051 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 PICALMQ13492 652 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 POLA2Q14181 598 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 SPATA5Q8NB90 893 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 ERO1AQ96HE7 468 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 HPS5Q9UPZ3 1129 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 TRIM17Q9Y577 477 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 ZSWIM8A7E2V4 1837 aa11.87□□□□□ -0.51
NPLOC4-212ENST00000573328 GAKO14976 1311 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 TNRC18O15417 2968 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 TESPA1A2RU30 521 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 ZBTB22O15209 634 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 CETPP11597 493 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 MCAMP43121 646 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 GSTO1P78417 241 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 SNAPC2Q13487 334 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 TNNI3KQ59H18 835 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 CCDC158Q5M9N0 1113 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 FBXO46Q6PJ61 603 aaPredicted RBP11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 CD99L2Q8TCZ2 262 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 PANK1Q8TE04 598 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 SSH3Q8TE77 659 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 MS4A4AQ96JQ5 239 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 PTPN18Q99952 460 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 MYH1P12882 1939 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
NPLOC4-212ENST00000573328 IRF6O14896 467 aa11.85□□□□□ -0.51
NPLOC4-212ENST00000573328 ENTPD3O75355 529 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms