RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 GOLGA6DP0CG33 693 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 ATP6V1E1P36543 226 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 HSPA2P54652 639 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 C1orf228Q6PIY5 440 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 TTC30AQ86WT1 665 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 RBM28Q9NW13 759 aaKnown RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 GOLGA6AQ9NYA3 693 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 TNRQ92752 1358 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 TSTA3Q13630 321 aaPredicted RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 PAG1Q9NWQ8 432 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 TRPC6Q9Y210 931 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 USH1GQ495M9 461 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 KIF9Q9HAQ2 790 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
USP6-204ENST00000572949 SLC12A2P55011 1212 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 NFATC2IPQ8NCF5 419 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 SSH1Q8WYL5 1049 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 MLXIPQ9HAP2 919 aa10.6□□□□□ -0.71
USP6-204ENST00000572949 RILPL1Q5EBL4 403 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
USP6-204ENST00000572949 CALCOCO2Q13137 446 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 ZNF449Q6P9G9 518 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 C16orf45Q96MC5 204 aaPredicted RBP10.59□□□□□ -0.71
USP6-204ENST00000572949 PLIN2Q99541 437 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 SPOPO43791 374 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 CEP128Q6ZU80 1094 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 CCDC42Q96M95 316 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 CAPN9O14815 690 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 CCNT1O60563 726 aaKnown RBP10.59□□□□□ -0.71
USP6-204ENST00000572949 YARSP54577 528 aaKnown RBP10.59□□□□□ -0.71
USP6-204ENST00000572949 UBXN1Q04323 297 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 SV2BQ7L1I2 683 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 CHMP6Q96FZ7 201 aa10.59□□□□□ -0.71
USP6-204ENST00000572949 SEC62Q99442 399 aaKnown RBP10.59□□□□□ -0.71
USP6-204ENST00000572949 RAD50Q92878 1312 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 PCDH11XQ9BZA7 1347 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 PCDH11YQ9BZA8 1340 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 ITKQ08881 620 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 LETM2Q2VYF4 491 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 ZNF277Q9NRM2 450 aaPredicted RBP10.58□□□□□ -0.72
USP6-204ENST00000572949 KRT83P78385 493 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 DCUN1D2Q6PH85 259 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 PSPC1Q8WXF1 523 aaKnown RBP10.58□□□□□ -0.72
USP6-204ENST00000572949 SPDYE2BA6NHP3 402 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 SPDYE6P0CI01 402 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 SSFA2P28290 1259 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 HIBADHP31937 336 aaKnown RBP10.58□□□□□ -0.72
USP6-204ENST00000572949 MAP7Q14244 749 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 CCDC129Q6ZRS4 1044 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 CALUO43852 315 aaPredicted RBP10.58□□□□□ -0.72
USP6-204ENST00000572949 KIAA1841Q6NSI8 718 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 BRF1Q92994 677 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 GLT8D2Q9H1C3 349 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 SLC1A4P43007 532 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 DPP9Q86TI2 863 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 RPS6KC1Q96S38 1066 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 DCAF15Q66K64 600 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
USP6-204ENST00000572949 TROQ12816 1431 aaPredicted RBP10.57□□□□□ -0.72
USP6-204ENST00000572949 KRT86O43790 486 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 ZNF165P49910 485 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 PPFIA1Q13136 1202 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 MICAL1Q8TDZ2 1067 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 ZKSCAN3Q9BRR0 538 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 RUSC2Q8N2Y8 1516 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 ZEB2O60315 1214 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 ARHGEF16Q5VV41 709 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 CERS3Q8IU89 383 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 GANCQ8TET4 914 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 PLEKHG3A1L390 1219 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 SARNPP82979 210 aaKnown RBP10.57□□□□□ -0.72
USP6-204ENST00000572949 HS1BP3Q53T59 392 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 OTUD6AQ7L8S5 288 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 NLRX1Q86UT6 975 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 PFDN6O15212 129 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 CD19P15391 556 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 Q6ZUG5 572 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 ZBED2Q9BTP6 218 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 NCKAP5LQ9HCH0 1330 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 CTAGE9A4FU28 777 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 GNPTABQ3T906 1256 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 WDR66Q8TBY9 1149 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 C19orf44Q9H6X5 657 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 TRAF5O00463 557 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 PSMD6Q15008 389 aa10.57□□□□□ -0.72
USP6-204ENST00000572949 SDCCAG8Q86SQ7 713 aaPredicted RBP10.57□□□□□ -0.72
USP6-204ENST00000572949 CCDC94Q9BW85 323 aaPredicted RBP10.57□□□□□ -0.72
USP6-204ENST00000572949 DENND4BO75064 1496 aaPredicted RBP10.56□□□□□ -0.72
USP6-204ENST00000572949 TNFAIP3P21580 790 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 RNASELQ05823 741 aaKnown RBP10.56□□□□□ -0.72
USP6-204ENST00000572949 TMTC4Q5T4D3 741 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 RYBPQ8N488 228 aaPredicted RBP10.56□□□□□ -0.72
USP6-204ENST00000572949 ADPGKQ9BRR6 497 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 IDI1Q13907 227 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 TSHZ3Q63HK5 1081 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 CDC37L1Q7L3B6 337 aa10.56□□□□□ -0.72
USP6-204ENST00000572949 NCAPG2Q86XI2 1143 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms