RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 B4GALNT3Q6L9W6 998 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 NETO1Q8TDF5 533 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 TRIM56Q9BRZ2 755 aaKnown RBP6□□□□□ -1.45
TVP23B-205ENST00000572845 ATXN3LQ9H3M9 355 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 ZNF576Q9H609 170 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 MKNK2Q9HBH9 465 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 VAV3Q9UKW4 847 aa6□□□□□ -1.45
TVP23B-205ENST00000572845 PAPLNO95428 1278 aa5.99□□□□□ -1.45
TVP23B-205ENST00000572845 ZNF792Q3KQV3 632 aa5.99□□□□□ -1.45
TVP23B-205ENST00000572845 CITED4Q96RK1 184 aa5.99□□□□□ -1.45
TVP23B-205ENST00000572845 WDR18Q9BV38 432 aa5.99□□□□□ -1.45
TVP23B-205ENST00000572845 PIDD1Q9HB75 910 aa5.99□□□□□ -1.45
TVP23B-205ENST00000572845 CPNE3O75131 537 aaKnown RBP5.98□□□□□ -1.45
TVP23B-205ENST00000572845 FARP2O94887 1054 aaPredicted RBP5.98□□□□□ -1.45
TVP23B-205ENST00000572845 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
TVP23B-205ENST00000572845 DNAJC25Q9H1X3 360 aa5.98□□□□□ -1.45
TVP23B-205ENST00000572845 TRAK1Q9UPV9 953 aa5.98□□□□□ -1.45
TVP23B-205ENST00000572845 DYNC1LI2O43237 492 aaPredicted RBP5.97□□□□□ -1.45
TVP23B-205ENST00000572845 NDUFB5O43674 189 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 ICMTO60725 284 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 FUT4P22083 530 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 PRKCQQ04759 706 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 PKN1Q16512 942 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 PHLDB3Q6NSJ2 640 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 TMEM40Q8WWA1 233 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 KRT82Q9NSB4 513 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 PPP4R2Q9NY27 417 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 CRIM1Q9NZV1 1036 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 PPP1R9AQ9ULJ8 1098 aa5.97□□□□□ -1.45
TVP23B-205ENST00000572845 DBX1A6NMT0 343 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 ID3Q02535 119 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 PRPF40BQ6NWY9 871 aaKnown RBP5.96□□□□□ -1.46
TVP23B-205ENST00000572845 SPRED2Q7Z698 418 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 PI4K2BQ8TCG2 481 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 ANO2Q9NQ90 1003 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 PCOLCE2Q9UKZ9 415 aa5.96□□□□□ -1.46
TVP23B-205ENST00000572845 TMEM265A0A087WTH1 108 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 TMPRSS2O15393 492 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 ECEL1O95672 775 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 FAM87AP0C7U9 286 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 PPP2R3AQ06190 1150 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 ZNF211Q13398 564 aaPredicted RBP5.95□□□□□ -1.46
TVP23B-205ENST00000572845 IFI16Q16666 785 aaKnown RBP5.95□□□□□ -1.46
TVP23B-205ENST00000572845 ARHGAP27Q6ZUM4 889 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 GLYCTKQ8IVS8 523 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 SMYD4Q8IYR2 804 aaPredicted RBP5.95□□□□□ -1.46
TVP23B-205ENST00000572845 FANCD2OSQ96PS1 177 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 RC3H2Q9HBD1 1191 aaKnown RBP5.95□□□□□ -1.46
TVP23B-205ENST00000572845 LGR6Q9HBX8 967 aa5.95□□□□□ -1.46
TVP23B-205ENST00000572845 TMEM238LA0A1B0GVL6 79 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 CD8BP10966 210 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 LIG1P18858 919 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 BNIP3Q12983 259 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 KIF4BQ2VIQ3 1234 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 ZNF574Q6ZN55 896 aaPredicted RBP5.94□□□□□ -1.46
TVP23B-205ENST00000572845 KSR1Q8IVT5 923 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 GLIS3Q8NEA6 775 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 HRASLS5Q96KN8 279 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 SLC38A3Q99624 504 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 NPHS2Q9NP85 383 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 SNX11Q9Y5W9 270 aa5.94□□□□□ -1.46
TVP23B-205ENST00000572845 ARID3CA6NKF2 412 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 RNGTTO60942 597 aaKnown RBP5.93□□□□□ -1.46
TVP23B-205ENST00000572845 USPL1Q5W0Q7 1092 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 WFDC3Q8IUB2 231 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 PLD6Q8N2A8 252 aaKnown RBP5.93□□□□□ -1.46
TVP23B-205ENST00000572845 BHLHE22Q8NFJ8 381 aaPredicted RBP5.93□□□□□ -1.46
TVP23B-205ENST00000572845 FAM168AQ92567 244 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 CCDC74AQ96AQ1 378 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 FAM129BQ96TA1 746 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 CCDC86Q9H6F5 360 aaKnown RBP5.93□□□□□ -1.46
TVP23B-205ENST00000572845 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 FAM53CQ9NYF3 392 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 USTQ9Y2C2 406 aa5.93□□□□□ -1.46
TVP23B-205ENST00000572845 CARMIL2Q6F5E8 1435 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 GADD45BO75293 160 aaPredicted RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 GSTP1P09211 210 aaKnown RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 XRCC5P13010 732 aaKnown RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 CDK5R2Q13319 367 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 AOC3Q16853 763 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 ZNF648Q5T619 568 aaPredicted RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 ANGEL2Q5VTE6 544 aaKnown RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 CCDC82Q8N4S0 544 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 DISC1Q9NRI5 854 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 TMEM39AQ9NV64 488 aa5.92□□□□□ -1.46
TVP23B-205ENST00000572845 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.92□□□□□ -1.46
TVP23B-205ENST00000572845 H3BRB1 525 aa5.91□□□□□ -1.46
TVP23B-205ENST00000572845 ORC1Q13415 861 aa5.91□□□□□ -1.46
TVP23B-205ENST00000572845 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
TVP23B-205ENST00000572845 SLC23A3Q6PIS1 610 aa5.91□□□□□ -1.46
TVP23B-205ENST00000572845 DUSP23Q9BVJ7 150 aa5.91□□□□□ -1.46
TVP23B-205ENST00000572845 TUT1Q9H6E5 874 aaKnown RBP5.91□□□□□ -1.46
TVP23B-205ENST00000572845 SSU72Q9NP77 194 aaKnown RBP5.91□□□□□ -1.46
TVP23B-205ENST00000572845 MBNL3Q9NUK0 354 aaKnown RBP5.91□□□□□ -1.46
TVP23B-205ENST00000572845 EIF1AYO14602 144 aaKnown RBP5.9□□□□□ -1.46
TVP23B-205ENST00000572845 ZNF862O60290 1169 aa5.9□□□□□ -1.46
TVP23B-205ENST00000572845 CEACAM5P06731 702 aa5.9□□□□□ -1.46
TVP23B-205ENST00000572845 OXCT1P55809 520 aa5.9□□□□□ -1.46
TVP23B-205ENST00000572845 TTLL4Q14679 1199 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms