RNA–Protein interactions for RNA: ENST00000572433.5

ITGAE-208, Transcript of integrin subunit alpha E, humanhuman

TSL 2

Gene ITGAE, Length 731 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAE-208ENST00000572433 FAM221AA4D161 298 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 SSBP05455 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
ITGAE-208ENST00000572433 CRKP46108 304 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 SOX9P48436 509 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 CWF19L2Q2TBE0 894 aaKnown RBP12.48□□□□□ -0.41
ITGAE-208ENST00000572433 SLITRK4Q8IW52 837 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 KLHDC7BQ96G42 594 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 ENAMQ9NRM1 1142 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 KRT82Q9NSB4 513 aa12.48□□□□□ -0.41
ITGAE-208ENST00000572433 TLR3O15455 904 aaKnown RBP12.47□□□□□ -0.41
ITGAE-208ENST00000572433 CILPO75339 1184 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 MAOBP27338 520 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 DGKGP49619 791 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 SETDB1Q15047 1291 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 SEZ6Q53EL9 994 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 HP1BP3Q5SSJ5 553 aaPredicted RBP12.47□□□□□ -0.41
ITGAE-208ENST00000572433 DTWD1Q8N5C7 304 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 NRSN2Q9GZP1 204 aa12.47□□□□□ -0.41
ITGAE-208ENST00000572433 STK10O94804 968 aaKnown RBP12.46□□□□□ -0.41
ITGAE-208ENST00000572433 COL9A3Q14050 684 aaPredicted RBP12.46□□□□□ -0.41
ITGAE-208ENST00000572433 LCE2CQ5TA81 110 aa12.46□□□□□ -0.41
ITGAE-208ENST00000572433 NEDD1Q8NHV4 660 aa12.46□□□□□ -0.41
ITGAE-208ENST00000572433 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
ITGAE-208ENST00000572433 HIRIP3Q9BW71 556 aaPredicted RBP12.46□□□□□ -0.41
ITGAE-208ENST00000572433 ZC3H12CQ9C0D7 883 aaKnown RBP12.46□□□□□ -0.41
ITGAE-208ENST00000572433 RRAGCQ9HB90 399 aa12.46□□□□□ -0.41
ITGAE-208ENST00000572433 TRAPPC3LQ5T215 181 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 ILDR2Q71H61 639 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 FBXO27Q8NI29 283 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 WHAMMQ8TF30 809 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
ITGAE-208ENST00000572433 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 CACNA2D2Q9NY47 1150 aa12.45□□□□□ -0.42
ITGAE-208ENST00000572433 NLRP12P59046 1061 aa12.44□□□□□ -0.42
ITGAE-208ENST00000572433 REC114Q7Z4M0 266 aa12.44□□□□□ -0.42
ITGAE-208ENST00000572433 CD68P34810 354 aaPredicted RBP12.43□□□□□ -0.42
ITGAE-208ENST00000572433 ZNF165P49910 485 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 RPL6Q02878 288 aaKnown RBP12.43□□□□□ -0.42
ITGAE-208ENST00000572433 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 GALNT11Q8NCW6 608 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 GPBAR1Q8TDU6 330 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 CPLX3Q8WVH0 158 aa12.43□□□□□ -0.42
ITGAE-208ENST00000572433 MCM4P33991 863 aa12.42□□□□□ -0.42
ITGAE-208ENST00000572433 PTPN11Q06124 597 aaPredicted RBP12.42□□□□□ -0.42
ITGAE-208ENST00000572433 RBL2Q08999 1139 aa12.42□□□□□ -0.42
ITGAE-208ENST00000572433 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
ITGAE-208ENST00000572433 CCDC86Q9H6F5 360 aaKnown RBP12.42□□□□□ -0.42
ITGAE-208ENST00000572433 PCDHA4Q9UN74 947 aa12.42□□□□□ -0.42
ITGAE-208ENST00000572433 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
ITGAE-208ENST00000572433 TM4SF5O14894 197 aa12.41□□□□□ -0.42
ITGAE-208ENST00000572433 ECEL1O95672 775 aa12.41□□□□□ -0.42
ITGAE-208ENST00000572433 RAC1P63000 192 aa12.41□□□□□ -0.42
ITGAE-208ENST00000572433 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
ITGAE-208ENST00000572433 SHROOM4Q9ULL8 1493 aa12.4□□□□□ -0.42
ITGAE-208ENST00000572433 LOC100289279A0A1B0GTE1 492 aa12.4□□□□□ -0.42
ITGAE-208ENST00000572433 DEAF1O75398 565 aaPredicted RBP12.4□□□□□ -0.42
ITGAE-208ENST00000572433 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
ITGAE-208ENST00000572433 TREML4Q6UXN2 200 aa12.4□□□□□ -0.42
ITGAE-208ENST00000572433 REXO1Q8N1G1 1221 aaKnown RBP12.4□□□□□ -0.42
ITGAE-208ENST00000572433 ZNF775Q96BV0 537 aaPredicted RBP12.4□□□□□ -0.42
ITGAE-208ENST00000572433 SRRTQ9BXP5 876 aaKnown RBP12.4□□□□□ -0.42
ITGAE-208ENST00000572433 SPDYE3A6NKU9 549 aa12.39□□□□□ -0.43
ITGAE-208ENST00000572433 PIK3R2O00459 728 aa12.39□□□□□ -0.43
ITGAE-208ENST00000572433 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
ITGAE-208ENST00000572433 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
ITGAE-208ENST00000572433 FERD3LQ96RJ6 166 aa12.39□□□□□ -0.43
ITGAE-208ENST00000572433 BRMS1Q9HCU9 246 aa12.39□□□□□ -0.43
ITGAE-208ENST00000572433 DDX3YO15523 660 aaKnown RBP12.38□□□□□ -0.43
ITGAE-208ENST00000572433 ADAM11O75078 769 aa12.38□□□□□ -0.43
ITGAE-208ENST00000572433 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.38□□□□□ -0.43
ITGAE-208ENST00000572433 FBXO11Q86XK2 927 aa12.38□□□□□ -0.43
ITGAE-208ENST00000572433 CKAP2LQ8IYA6 745 aa12.38□□□□□ -0.43
ITGAE-208ENST00000572433 SNCAIPQ9Y6H5 919 aa12.38□□□□□ -0.43
ITGAE-208ENST00000572433 A0A0A0MRY4 1105 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 CTSBP07858 339 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 IMPDH2P12268 514 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 KIF4BQ2VIQ3 1234 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 DPH6Q7L8W6 267 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 HDXQ7Z353 690 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 FMR1NBQ8N0W7 255 aaPredicted RBP12.37□□□□□ -0.43
ITGAE-208ENST00000572433 ZNF408Q9H9D4 720 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 PPT2Q9UMR5 302 aa12.37□□□□□ -0.43
ITGAE-208ENST00000572433 ZNF862O60290 1169 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 SLFN14P0C7P3 912 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 LIG1P18858 919 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
ITGAE-208ENST00000572433 GK5Q6ZS86 529 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 LNPKQ9C0E8 428 aa12.36□□□□□ -0.43
ITGAE-208ENST00000572433 DLL1O00548 723 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 GNB5O14775 395 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 ELMO3Q96BJ8 720 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 TRIM11Q96F44 468 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 KCNK4Q9NYG8 393 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
ITGAE-208ENST00000572433 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms