RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 Q7L0L9 218 aa9.55□□□□□ -0.88
SMG6-211ENST00000572369 ZGPATQ8N5A5 531 aaKnown RBP9.55□□□□□ -0.88
SMG6-211ENST00000572369 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
SMG6-211ENST00000572369 GBA2Q9HCG7 927 aaPredicted RBP9.55□□□□□ -0.88
SMG6-211ENST00000572369 GPR108Q9NPR9 543 aa9.55□□□□□ -0.88
SMG6-211ENST00000572369 FPGT-TNNI3KV9GXZ4 949 aa9.55□□□□□ -0.88
SMG6-211ENST00000572369 TTC28Q96AY4 2481 aa9.55□□□□□ -0.88
SMG6-211ENST00000572369 EYSQ5T1H1 3165 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 FKTNO75072 461 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 LDHBP07195 334 aaKnown RBP9.54□□□□□ -0.88
SMG6-211ENST00000572369 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 NF2P35240 595 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 AACSQ86V21 672 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 CLASRPQ8N2M8 674 aaKnown RBP9.54□□□□□ -0.88
SMG6-211ENST00000572369 TEKT1Q969V4 418 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 ARMC5Q96C12 935 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 KIF1BPQ96EK5 621 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 CRBNQ96SW2 442 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 CCDC8Q9H0W5 538 aaPredicted RBP9.54□□□□□ -0.88
SMG6-211ENST00000572369 IL1RAPL2Q9NP60 686 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 MTMR10Q9NXD2 777 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 ABCF2Q9UG63 623 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 SERPINA10Q9UK55 444 aa9.54□□□□□ -0.88
SMG6-211ENST00000572369 SCAF8Q9UPN6 1271 aaKnown RBP9.54□□□□□ -0.88
SMG6-211ENST00000572369 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.54□□□□□ -0.88
SMG6-211ENST00000572369 MYH2Q9UKX2 1941 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 RAB11FIP3O75154 756 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 CRKP46108 304 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 RASGRF1Q13972 1273 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 TTLL12Q14166 644 aaPredicted RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 SPTY2D1Q68D10 685 aaPredicted RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 DLK2Q6UY11 383 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 DZIP1Q86YF9 867 aaKnown RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 APOBEC3FQ8IUX4 373 aaKnown RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 C2orf69Q8N8R5 385 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 DBNDD2Q9BQY9 259 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 TMEM106CQ9BVX2 250 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 TDRD3Q9H7E2 651 aaKnown RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 TMOD2Q9NZR1 351 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 SUGT1Q9Y2Z0 365 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 SUPT16HQ9Y5B9 1047 aaKnown RBP9.53□□□□□ -0.88
SMG6-211ENST00000572369 SYNGAP1Q96PV0 1343 aa9.53□□□□□ -0.88
SMG6-211ENST00000572369 SPDYE2BA6NHP3 402 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 SPDYE6P0CI01 402 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 ARID4AP29374 1257 aaPredicted RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 PRDX5P30044 214 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 HDLBPQ00341 1268 aaKnown RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 TNFAIP1Q13829 316 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 GRIK5Q16478 980 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 ERICH6Q7L0X2 663 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 SLF2Q8IX21 1173 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 SIRT2Q8IXJ6 389 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 SPATA5Q8NB90 893 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 MTMR14Q8NCE2 650 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 PRUNE2Q8WUY3 3088 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 CDCA5Q96FF9 252 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 PRMT6Q96LA8 375 aaPredicted RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 ZBTB47Q9UFB7 747 aaPredicted RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 PCDHAC2Q9Y5I4 1007 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 LAMA2P24043 3122 aaKnown RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 AK9Q5TCS8 1911 aa9.52□□□□□ -0.89
SMG6-211ENST00000572369 COL1A1P02452 1464 aaPredicted RBP9.52□□□□□ -0.89
SMG6-211ENST00000572369 TMEM265A0A087WTH1 108 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 TNNI2P48788 182 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 PRAMEF18Q5VWM3 479 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 OTOP1Q7RTM1 612 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 RASAL3Q86YV0 1011 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 DPF3Q92784 378 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 EAF2Q96CJ1 260 aaPredicted RBP9.51□□□□□ -0.89
SMG6-211ENST00000572369 ZBED3Q96IU2 234 aaPredicted RBP9.51□□□□□ -0.89
SMG6-211ENST00000572369 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 SNRKQ9NRH2 765 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 TLR7Q9NYK1 1049 aaKnown RBP9.51□□□□□ -0.89
SMG6-211ENST00000572369 RAI14Q9P0K7 980 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 HMG20BQ9P0W2 317 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 LRP2BPQ9P2M1 347 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 ZNF70Q9UC06 446 aaPredicted RBP9.51□□□□□ -0.89
SMG6-211ENST00000572369 PDS5AQ29RF7 1337 aaKnown RBP9.51□□□□□ -0.89
SMG6-211ENST00000572369 SALL1Q9NSC2 1324 aa9.51□□□□□ -0.89
SMG6-211ENST00000572369 TCP10L2B9ZVM9 353 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 MCAMP43121 646 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 PRKG1Q13976 671 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 DIXDC1Q155Q3 683 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 PI16Q6UXB8 463 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 NOL10Q9BSC4 688 aaKnown RBP9.5□□□□□ -0.89
SMG6-211ENST00000572369 MRIQ9BWK5 157 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
SMG6-211ENST00000572369 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
SMG6-211ENST00000572369 DBNLQ9UJU6 430 aaKnown RBP9.5□□□□□ -0.89
SMG6-211ENST00000572369 MYO5AQ9Y4I1 1855 aaKnown RBP9.49□□□□□ -0.89
SMG6-211ENST00000572369 LDHCP07864 332 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 GSTO1P78417 241 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 MAP3K12Q12852 859 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 SUPT20HL1Q3ZLR7 823 aa9.49□□□□□ -0.89
SMG6-211ENST00000572369 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms