RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 ADGRA2Q96PE1 1338 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 RFX5P48382 616 aaPredicted RBP24.11■■□□□ 1.45
NUP88-203ENST00000572019 NFIAQ12857 509 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 FKBP1CQ5VVH2 108 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 C17orf99Q6UX52 265 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 FAM9BQ8IZU0 186 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 MRIQ9BWK5 157 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 TMOD2Q9NZR1 351 aa24.11■■□□□ 1.45
NUP88-203ENST00000572019 H0YGN5 161 aa24.1■■□□□ 1.45
NUP88-203ENST00000572019 TCP10Q12799 353 aa24.1■■□□□ 1.45
NUP88-203ENST00000572019 MOGSQ13724 837 aa24.1■■□□□ 1.45
NUP88-203ENST00000572019 DIXDC1Q155Q3 683 aa24.1■■□□□ 1.45
NUP88-203ENST00000572019 HHIPL2Q6UWX4 724 aa24.1■■□□□ 1.45
NUP88-203ENST00000572019 ARHGEF6Q15052 776 aa24.09■■□□□ 1.45
NUP88-203ENST00000572019 PUM3Q15397 648 aaKnown RBP24.09■■□□□ 1.45
NUP88-203ENST00000572019 TRIM47Q96LD4 638 aa24.09■■□□□ 1.45
NUP88-203ENST00000572019 ZNF341Q9BYN7 854 aa24.09■■□□□ 1.45
NUP88-203ENST00000572019 ZCCHC17Q9NP64 241 aaKnown RBP24.09■■□□□ 1.45
NUP88-203ENST00000572019 DAGLAQ9Y4D2 1042 aa24.09■■□□□ 1.45
NUP88-203ENST00000572019 PTPRFP10586 1907 aa24.08■■□□□ 1.45
NUP88-203ENST00000572019 MYH2Q9UKX2 1941 aa24.08■■□□□ 1.45
NUP88-203ENST00000572019 DOCK2Q92608 1830 aa24.08■■□□□ 1.45
NUP88-203ENST00000572019 CDC42EP5Q6NZY7 148 aa24.08■■□□□ 1.45
NUP88-203ENST00000572019 ZFPM1Q8IX07 1006 aa24.08■■□□□ 1.45
NUP88-203ENST00000572019 SZT2Q5T011 3432 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 ANP32CO43423 234 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 PRDX5P30044 214 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 PPATQ06203 517 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 ATG9AQ7Z3C6 839 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 FAM198AQ9UFP1 575 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 ZNF112Q9UJU3 913 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 SUGT1Q9Y2Z0 365 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 MAST3O60307 1309 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 KIF16BQ96L93 1317 aa24.07■■□□□ 1.44
NUP88-203ENST00000572019 PDHXO00330 501 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 IFIT1P09914 478 aaKnown RBP24.06■■□□□ 1.44
NUP88-203ENST00000572019 SLURP2P0DP57 97 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 PSMC4P43686 418 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 KIF22Q14807 665 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 DCAF15Q66K64 600 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 FAM151AQ8WW52 585 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 SSH1Q8WYL5 1049 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 KCNH4Q9UQ05 1017 aa24.06■■□□□ 1.44
NUP88-203ENST00000572019 EYA2O00167 538 aa24.05■■□□□ 1.44
NUP88-203ENST00000572019 OSBPP22059 807 aa24.05■■□□□ 1.44
NUP88-203ENST00000572019 SRRDQ9UH36 339 aa24.05■■□□□ 1.44
NUP88-203ENST00000572019 PHIPQ8WWQ0 1821 aa24.05■■□□□ 1.44
NUP88-203ENST00000572019 DOCK3Q8IZD9 2030 aa24.05■■□□□ 1.44
NUP88-203ENST00000572019 ANKRD23Q86SG2 305 aa24.04■■□□□ 1.44
NUP88-203ENST00000572019 SLC5A1P13866 664 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 GPAT2Q6NUI2 795 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 WDR66Q8TBY9 1149 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 HOOK2Q96ED9 719 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 PTPRCP08575 1304 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 ATRNL1Q5VV63 1379 aa24.03■■□□□ 1.44
NUP88-203ENST00000572019 WDHD1O75717 1129 aaPredicted RBP24.02■■□□□ 1.44
NUP88-203ENST00000572019 CYP2C8P10632 490 aa24.02■■□□□ 1.44
NUP88-203ENST00000572019 LPIN2Q92539 896 aa24.02■■□□□ 1.44
NUP88-203ENST00000572019 GNRH1P01148 92 aa24.01■■□□□ 1.43
NUP88-203ENST00000572019 NOL9Q5SY16 702 aaKnown RBP24.01■■□□□ 1.43
NUP88-203ENST00000572019 SIL1Q9H173 461 aa24.01■■□□□ 1.43
NUP88-203ENST00000572019 RANBP2P49792 3224 aaKnown RBP24.01■■□□□ 1.43
NUP88-203ENST00000572019 FMNL1O95466 1100 aaPredicted RBP24■■□□□ 1.43
NUP88-203ENST00000572019 PRMT2P55345 433 aa24■■□□□ 1.43
NUP88-203ENST00000572019 CHRDL2Q6WN34 429 aa24■■□□□ 1.43
NUP88-203ENST00000572019 USP40Q9NVE5 1235 aa24■■□□□ 1.43
NUP88-203ENST00000572019 GABRQQ9UN88 632 aa24■■□□□ 1.43
NUP88-203ENST00000572019 MYPNQ86TC9 1320 aa24■■□□□ 1.43
NUP88-203ENST00000572019 DOCK1Q14185 1865 aa24■■□□□ 1.43
NUP88-203ENST00000572019 PHF20L1A8MW92 1017 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 BCRP11274 1271 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 GRK4P32298 578 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 PHKA1P46020 1223 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 PRKCZQ05513 592 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 SH3BP5LQ7L8J4 393 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 UBE2Q1Q7Z7E8 422 aa23.99■■□□□ 1.43
NUP88-203ENST00000572019 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.99■■□□□ 1.43
NUP88-203ENST00000572019 CCL5P13501 91 aa23.98■■□□□ 1.43
NUP88-203ENST00000572019 ADORA1P30542 326 aa23.98■■□□□ 1.43
NUP88-203ENST00000572019 RAET1EQ8TD07 263 aa23.98■■□□□ 1.43
NUP88-203ENST00000572019 RFX7Q2KHR2 1363 aa23.98■■□□□ 1.43
NUP88-203ENST00000572019 ZEB1P37275 1124 aaPredicted RBP23.97■■□□□ 1.43
NUP88-203ENST00000572019 ATP2B3Q16720 1220 aa23.97■■□□□ 1.43
NUP88-203ENST00000572019 ALPK3Q96L96 1907 aa23.97■■□□□ 1.43
NUP88-203ENST00000572019 RBM27Q9P2N5 1060 aaKnown RBP23.97■■□□□ 1.43
NUP88-203ENST00000572019 PA2G4Q9UQ80 394 aaKnown RBP23.97■■□□□ 1.43
NUP88-203ENST00000572019 LDHBP07195 334 aaKnown RBP23.96■■□□□ 1.43
NUP88-203ENST00000572019 RGS3P49796 1198 aa23.96■■□□□ 1.43
NUP88-203ENST00000572019 GJA8P48165 433 aa23.95■■□□□ 1.42
NUP88-203ENST00000572019 CCDC84Q86UT8 332 aaPredicted RBP23.95■■□□□ 1.42
NUP88-203ENST00000572019 DPF3Q92784 378 aa23.95■■□□□ 1.42
NUP88-203ENST00000572019 SALL1Q9NSC2 1324 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 GJB1P08034 283 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 CDCA7LQ96GN5 454 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 PARK7Q99497 189 aaKnown RBP23.94■■□□□ 1.42
NUP88-203ENST00000572019 RNF208Q9H0X6 261 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 UNC93B1Q9H1C4 597 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 DDX4Q9NQI0 724 aaKnown RBP23.94■■□□□ 1.42
NUP88-203ENST00000572019 ZHX2Q9Y6X8 837 aa23.94■■□□□ 1.42
NUP88-203ENST00000572019 A0A0G2JLL6 359 aaPredicted RBP23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms