RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 TAF1CQ15572 869 aaPredicted RBP16.9■□□□□ 0.3
RPAIN-209ENST00000571558 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 SERPINA10Q9UK55 444 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 PTCH2Q9Y6C5 1203 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
RPAIN-209ENST00000571558 KIF22Q14807 665 aa16.89■□□□□ 0.29
RPAIN-209ENST00000571558 ATG9AQ7Z3C6 839 aa16.89■□□□□ 0.29
RPAIN-209ENST00000571558 ELP3Q9H9T3 547 aa16.89■□□□□ 0.29
RPAIN-209ENST00000571558 CCL15-CCL14A0A0B4J2E2 113 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 F8W031 263 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-209ENST00000571558 H0YGN5 161 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 CIAO1O76071 339 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 MAP3K9P80192 1104 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 CAP1Q01518 475 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 CCL15Q16663 113 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 HSP90AB4PQ58FF6 505 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.88■□□□□ 0.29
RPAIN-209ENST00000571558 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 PUS3Q9BZE2 481 aaKnown RBP16.88■□□□□ 0.29
RPAIN-209ENST00000571558 SIL1Q9H173 461 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 FAM205AQ6ZU69 1335 aa16.88■□□□□ 0.29
RPAIN-209ENST00000571558 EYA2O00167 538 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TLR2O60603 784 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TNNI2P48788 182 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-209ENST00000571558 LRRC24Q50LG9 513 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 HELBQ8NG08 1087 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-209ENST00000571558 CSADQ9Y600 493 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TAF5LO75529 589 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 RHPN1Q8TCX5 695 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 ZNF70Q9UC06 446 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-209ENST00000571558 RIPOR2Q9Y4F9 1068 aa16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.87■□□□□ 0.29
RPAIN-209ENST00000571558 TRIOBPQ9H2D6 2365 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 CETPP11597 493 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
RPAIN-209ENST00000571558 G3BP1Q13283 466 aaKnown RBP eCLIP16.86■□□□□ 0.29
RPAIN-209ENST00000571558 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.86■□□□□ 0.29
RPAIN-209ENST00000571558 LRRCC1Q9C099 1032 aa16.86■□□□□ 0.29
RPAIN-209ENST00000571558 APBB1O00213 710 aa16.85■□□□□ 0.29
RPAIN-209ENST00000571558 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
RPAIN-209ENST00000571558 VGLL4Q14135 290 aa16.85■□□□□ 0.29
RPAIN-209ENST00000571558 FAM43AQ8N2R8 423 aa16.85■□□□□ 0.29
RPAIN-209ENST00000571558 KIF1BPQ96EK5 621 aa16.85■□□□□ 0.29
RPAIN-209ENST00000571558 SPDYE5A6NIY4 337 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 SNAP23O00161 211 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-209ENST00000571558 OS9Q13438 667 aaPredicted RBP16.84■□□□□ 0.29
RPAIN-209ENST00000571558 MFSD14BQ5SR56 506 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 SKAP1Q86WV1 359 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 ERO1BQ86YB8 467 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 HOOK2Q96ED9 719 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 TDRD3Q9H7E2 651 aaKnown RBP16.84■□□□□ 0.29
RPAIN-209ENST00000571558 TTF2Q9UNY4 1162 aaKnown RBP16.84■□□□□ 0.29
RPAIN-209ENST00000571558 SZT2Q5T011 3432 aa16.84■□□□□ 0.29
RPAIN-209ENST00000571558 AOX1Q06278 1338 aa16.83■□□□□ 0.29
RPAIN-209ENST00000571558 RANBP2P49792 3224 aaKnown RBP16.83■□□□□ 0.28
RPAIN-209ENST00000571558 PDE4AP27815 886 aa16.83■□□□□ 0.28
RPAIN-209ENST00000571558 HDLBPQ00341 1268 aaKnown RBP16.83■□□□□ 0.28
RPAIN-209ENST00000571558 TFCP2Q12800 502 aa16.83■□□□□ 0.28
RPAIN-209ENST00000571558 VGLL2Q8N8G2 317 aa16.83■□□□□ 0.28
RPAIN-209ENST00000571558 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
RPAIN-209ENST00000571558 LNPKQ9C0E8 428 aa16.83■□□□□ 0.28
RPAIN-209ENST00000571558 HOXD10P28358 340 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 SNAPC2Q13487 334 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 UBE4AQ14139 1066 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 SH3TC2Q8TF17 1288 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 HTATIP2Q9BUP3 242 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 CNNM1Q9NRU3 951 aa16.82■□□□□ 0.28
RPAIN-209ENST00000571558 SALL3Q9BXA9 1300 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 CAPN2P17655 700 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 CNKSR2Q8WXI2 1034 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 DPF3Q92784 378 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 IL1RAPL2Q9NP60 686 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 OTOFQ9HC10 1997 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
RPAIN-209ENST00000571558 HIBADHP31937 336 aaKnown RBP16.8■□□□□ 0.28
RPAIN-209ENST00000571558 TMEM39BQ9GZU3 492 aa16.8■□□□□ 0.28
RPAIN-209ENST00000571558 RBM27Q9P2N5 1060 aaKnown RBP16.8■□□□□ 0.28
RPAIN-209ENST00000571558 NR2E3Q9Y5X4 410 aa16.8■□□□□ 0.28
RPAIN-209ENST00000571558 A0A1W2PPC1 479 aa16.79■□□□□ 0.28
RPAIN-209ENST00000571558 TCP10L2B9ZVM9 353 aa16.79■□□□□ 0.28
RPAIN-209ENST00000571558 CRKP46108 304 aa16.79■□□□□ 0.28
RPAIN-209ENST00000571558 PPIL2Q13356 520 aa16.79■□□□□ 0.28
RPAIN-209ENST00000571558 METTL24Q5JXM2 366 aa16.79■□□□□ 0.28
RPAIN-209ENST00000571558 FKBP1CQ5VVH2 108 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms