RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 TEPSINQ96N21 525 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 DNAJC2Q99543 621 aaKnown RBP8.54□□□□□ -1.04
SMG6-209ENST00000571442 LNPKQ9C0E8 428 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 RAI14Q9P0K7 980 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 MYH7P12883 1935 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 MROH7-TTC4A0A0A0MT08 1334 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 MAST3O60307 1309 aa8.54□□□□□ -1.04
SMG6-209ENST00000571442 OTOFQ9HC10 1997 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 PAPPA2Q9BXP8 1791 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 SIPA1L1O43166 1804 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 GPR75-ASB3A0A0A6YYF3 556 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 TMEM88BA6NKF7 163 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 GOLIM4O00461 696 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 MAP4K4O95819 1239 aaPredicted RBP8.53□□□□□ -1.04
SMG6-209ENST00000571442 PDE4AP27815 886 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 BTDP43251 543 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 RASA3Q14644 834 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 NBPF12Q5TAG4 269 aaPredicted RBP8.53□□□□□ -1.04
SMG6-209ENST00000571442 SKAP1Q86WV1 359 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 ZGPATQ8N5A5 531 aaKnown RBP8.53□□□□□ -1.04
SMG6-209ENST00000571442 GCC1Q96CN9 775 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
SMG6-209ENST00000571442 HAUS7Q99871 368 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 TMEM39BQ9GZU3 492 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 DEFB129Q9H1M3 183 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 DDX4Q9NQI0 724 aaKnown RBP8.53□□□□□ -1.04
SMG6-209ENST00000571442 LRP2BPQ9P2M1 347 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
SMG6-209ENST00000571442 FOCADQ5VW36 1801 aa8.52□□□□□ -1.04
SMG6-209ENST00000571442 TCRBV5S4A2TA0A5A2 114 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 WDHD1O75717 1129 aaPredicted RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 IDH1O75874 414 aaKnown RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 DYNLL1P63167 89 aaKnown RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 NUCB1Q02818 461 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 PRKG1Q13976 671 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 SH3BP5LQ7L8J4 393 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 APOBEC3FQ8IUX4 373 aaKnown RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 MAGEB6Q8N7X4 407 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
SMG6-209ENST00000571442 ECHDC1Q9NTX5 307 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 USP40Q9NVE5 1235 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 TLL2Q9Y6L7 1015 aa8.52□□□□□ -1.05
SMG6-209ENST00000571442 MYO1BO43795 1136 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 PDE6AP16499 860 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 MX1P20591 662 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 CYP7A1P22680 504 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 TCP10Q12799 353 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 NAA16Q6N069 864 aaPredicted RBP8.51□□□□□ -1.05
SMG6-209ENST00000571442 SAPCD2Q86UD0 394 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 CHD1LQ86WJ1 897 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 MIGA1Q8NAN2 632 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 SH3RF3Q8TEJ3 882 aaPredicted RBP8.51□□□□□ -1.05
SMG6-209ENST00000571442 ZIC5Q96T25 663 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 GBA2Q9HCG7 927 aaPredicted RBP8.51□□□□□ -1.05
SMG6-209ENST00000571442 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
SMG6-209ENST00000571442 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMG6-209ENST00000571442 AK9Q5TCS8 1911 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 ATRNL1Q5VV63 1379 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 DDTLA6NHG4 134 aaPredicted RBP8.5□□□□□ -1.05
SMG6-209ENST00000571442 RASSF10A6NK89 507 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 UBE2Q2LH0YL09 131 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 VEGFBP49765 207 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 RGS3P49796 1198 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 PDE1AP54750 535 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 EVX2Q03828 476 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 DDX60LQ5H9U9 1706 aaKnown RBP8.5□□□□□ -1.05
SMG6-209ENST00000571442 CYP4F22Q6NT55 531 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 AIDAQ96BJ3 306 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 RIOK1Q9BRS2 568 aaKnown RBP8.5□□□□□ -1.05
SMG6-209ENST00000571442 STAP2Q9UGK3 403 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 ABT1Q9ULW3 272 aaKnown RBP8.5□□□□□ -1.05
SMG6-209ENST00000571442 TTC41PQ6P2S7 1318 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 ZNF532Q9HCE3 1301 aa8.5□□□□□ -1.05
SMG6-209ENST00000571442 USP2O75604 605 aaPredicted RBP8.49□□□□□ -1.05
SMG6-209ENST00000571442 ADD2P35612 726 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 HUNKP57058 714 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 PPP4CP60510 307 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 PICALMQ13492 652 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 SLC9C2Q5TAH2 1124 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 FKBP1CQ5VVH2 108 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 FAM83AQ86UY5 434 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 FAM151AQ8WW52 585 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 CLMNQ96JQ2 1002 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 IDI2Q9BXS1 227 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 THSD7BQ9C0I4 1608 aa8.49□□□□□ -1.05
SMG6-209ENST00000571442 RPAP1Q9BWH6 1393 aaPredicted RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 MYH1P12882 1939 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 FAM196BA6NMK8 535 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 FAM155AB1AL88 458 aaPredicted RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 SMIM22K7EJ46 135 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 PRKAB2O43741 272 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 AOC2O75106 756 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 LDHCP07864 332 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 GSTO1P78417 241 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 MAP3K12Q12852 859 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 TNFAIP1Q13829 316 aa8.48□□□□□ -1.05
SMG6-209ENST00000571442 TTF1Q15361 905 aaPredicted RBP8.48□□□□□ -1.05
SMG6-209ENST00000571442 DEFB115Q30KQ5 88 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms