RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 DGKZQ13574 1117 aa37.41■■■■□ 3.58
CTDNEP1-206ENST00000571409 DZIP1Q86YF9 867 aaKnown RBP37.41■■■■□ 3.58
CTDNEP1-206ENST00000571409 ELP3Q9H9T3 547 aa37.41■■■■□ 3.58
CTDNEP1-206ENST00000571409 RPAP1Q9BWH6 1393 aaPredicted RBP37.41■■■■□ 3.58
CTDNEP1-206ENST00000571409 GJA5P36382 358 aa37.4■■■■□ 3.58
CTDNEP1-206ENST00000571409 PPP1R3FQ6ZSY5 799 aaPredicted RBP37.4■■■■□ 3.58
CTDNEP1-206ENST00000571409 INHBEP58166 350 aa37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 MAP3K9P80192 1104 aa37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 SPTY2D1Q68D10 685 aaPredicted RBP37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 DDX55Q8NHQ9 600 aaKnown RBP eCLIP37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 USP40Q9NVE5 1235 aa37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 HMG20BQ9P0W2 317 aa37.39■■■■□ 3.58
CTDNEP1-206ENST00000571409 MS4A1P11836 297 aa37.38■■■■□ 3.57
CTDNEP1-206ENST00000571409 ARID4AP29374 1257 aaPredicted RBP37.38■■■■□ 3.57
CTDNEP1-206ENST00000571409 FAM151AQ8WW52 585 aa37.38■■■■□ 3.57
CTDNEP1-206ENST00000571409 HOOK2Q96ED9 719 aa37.38■■■■□ 3.57
CTDNEP1-206ENST00000571409 GPR108Q9NPR9 543 aa37.38■■■■□ 3.57
CTDNEP1-206ENST00000571409 TCP10Q12799 353 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 VGLL4Q14135 290 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 TNNI3KQ59H18 835 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 PI16Q6UXB8 463 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 SPATA5Q8NB90 893 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 OPTNQ96CV9 577 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 FPGT-TNNI3KV9GXZ4 949 aa37.37■■■■□ 3.57
CTDNEP1-206ENST00000571409 NFIAQ12857 509 aa37.36■■■■□ 3.57
CTDNEP1-206ENST00000571409 CEP85Q6P2H3 762 aa37.36■■■■□ 3.57
CTDNEP1-206ENST00000571409 NOP58Q9Y2X3 529 aaKnown RBP37.36■■■■□ 3.57
CTDNEP1-206ENST00000571409 CSADQ9Y600 493 aa37.36■■■■□ 3.57
CTDNEP1-206ENST00000571409 GAKO14976 1311 aa37.36■■■■□ 3.57
CTDNEP1-206ENST00000571409 ERICH6Q7L0X2 663 aa37.35■■■■□ 3.57
CTDNEP1-206ENST00000571409 IFNL1Q8IU54 200 aa37.35■■■■□ 3.57
CTDNEP1-206ENST00000571409 SLF2Q8IX21 1173 aa37.35■■■■□ 3.57
CTDNEP1-206ENST00000571409 ALDH1A1P00352 501 aa37.34■■■■□ 3.57
CTDNEP1-206ENST00000571409 DCAF15Q66K64 600 aa37.34■■■■□ 3.57
CTDNEP1-206ENST00000571409 UQCRFS1P1P0C7P4 283 aa37.33■■■■□ 3.57
CTDNEP1-206ENST00000571409 WRNIP1Q96S55 665 aa37.33■■■■□ 3.57
CTDNEP1-206ENST00000571409 CFHR5Q9BXR6 569 aa37.33■■■■□ 3.57
CTDNEP1-206ENST00000571409 FAM198AQ9UFP1 575 aa37.33■■■■□ 3.57
CTDNEP1-206ENST00000571409 RCAN3Q9UKA8 241 aa37.33■■■■□ 3.57
CTDNEP1-206ENST00000571409 MCAMP43121 646 aa37.32■■■■□ 3.56
CTDNEP1-206ENST00000571409 MECOMQ03112 1051 aa37.32■■■■□ 3.56
CTDNEP1-206ENST00000571409 ZNF296Q8WUU4 475 aaPredicted RBP37.32■■■■□ 3.56
CTDNEP1-206ENST00000571409 CNKSR2Q8WXI2 1034 aa37.32■■■■□ 3.56
CTDNEP1-206ENST00000571409 FAM163AQ96GL9 167 aaPredicted RBP37.32■■■■□ 3.56
CTDNEP1-206ENST00000571409 IGF2BP3O00425 579 aaKnown RBP eCLIP37.31■■■■□ 3.56
CTDNEP1-206ENST00000571409 MIGA2Q7L4E1 593 aa37.31■■■■□ 3.56
CTDNEP1-206ENST00000571409 DBNDD2Q9BQY9 259 aa37.31■■■■□ 3.56
CTDNEP1-206ENST00000571409 AK9Q5TCS8 1911 aa37.31■■■■□ 3.56
CTDNEP1-206ENST00000571409 GPR25O00155 361 aa37.3■■■■□ 3.56
CTDNEP1-206ENST00000571409 TBC1D9Q6ZT07 1266 aa37.3■■■■□ 3.56
CTDNEP1-206ENST00000571409 R3HDMLQ9H3Y0 253 aa37.3■■■■□ 3.56
CTDNEP1-206ENST00000571409 MROH7-TTC4A0A0A0MT08 1334 aa37.3■■■■□ 3.56
CTDNEP1-206ENST00000571409 BTDP43251 543 aa37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 NOM1Q5C9Z4 860 aaKnown RBP37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 TTC39AQ5SRH9 613 aa37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 ZKSCAN4Q969J2 545 aaPredicted RBP37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 ZNF341Q9BYN7 854 aa37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 SNCAIPQ9Y6H5 919 aa37.29■■■■□ 3.56
CTDNEP1-206ENST00000571409 CCDC85CA6NKD9 419 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 CCDC158Q5M9N0 1113 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 CTU1Q7Z7A3 348 aaKnown RBP37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 ZNF384Q8TF68 577 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 OTUD5Q96G74 571 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 IDI2Q9BXS1 227 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 COG6Q9Y2V7 657 aa37.28■■■■□ 3.56
CTDNEP1-206ENST00000571409 RGS3P49796 1198 aa37.27■■■■□ 3.56
CTDNEP1-206ENST00000571409 ZFPM1Q8IX07 1006 aa37.27■■■■□ 3.56
CTDNEP1-206ENST00000571409 TESPA1A2RU30 521 aaPredicted RBP37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 SPDYE5A6NIY4 337 aa37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 OTUD7BQ6GQQ9 843 aa37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 NSUN4Q96CB9 384 aaKnown RBP37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 MS4A4AQ96JQ5 239 aa37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 RAI14Q9P0K7 980 aa37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 DDX19BQ9UMR2 479 aa37.26■■■■□ 3.56
CTDNEP1-206ENST00000571409 RFX7Q2KHR2 1363 aa37.26■■■■□ 3.55
CTDNEP1-206ENST00000571409 PTPN18Q99952 460 aa37.25■■■■□ 3.55
CTDNEP1-206ENST00000571409 EXOC6BQ9Y2D4 811 aa37.25■■■■□ 3.55
CTDNEP1-206ENST00000571409 ENTPD3O75355 529 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 GSTO1P78417 241 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 ERO1BQ86YB8 467 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 SNRKQ9NRH2 765 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 LRP2BPQ9P2M1 347 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 DOCK2Q92608 1830 aa37.24■■■■□ 3.55
CTDNEP1-206ENST00000571409 GPR75-ASB3A0A0A6YYF3 556 aa37.23■■■■□ 3.55
CTDNEP1-206ENST00000571409 LDHCP07864 332 aa37.23■■■■□ 3.55
CTDNEP1-206ENST00000571409 GTF2A2P52657 109 aa37.23■■■■□ 3.55
CTDNEP1-206ENST00000571409 CCDC8Q9H0W5 538 aaPredicted RBP37.23■■■■□ 3.55
CTDNEP1-206ENST00000571409 FKTNO75072 461 aa37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 WDHD1O75717 1129 aaPredicted RBP37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 INPP5BP32019 993 aa37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 EAF2Q96CJ1 260 aaPredicted RBP37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 TLR7Q9NYK1 1049 aaKnown RBP37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 DBNLQ9UJU6 430 aaKnown RBP37.22■■■■□ 3.55
CTDNEP1-206ENST00000571409 CCL15-CCL14A0A0B4J2E2 113 aa37.21■■■■□ 3.55
CTDNEP1-206ENST00000571409 PICALMQ13492 652 aa37.21■■■■□ 3.55
CTDNEP1-206ENST00000571409 CCL15Q16663 113 aa37.21■■■■□ 3.55
CTDNEP1-206ENST00000571409 DDX4Q9NQI0 724 aaKnown RBP37.21■■■■□ 3.55
CTDNEP1-206ENST00000571409 ZNF112Q9UJU3 913 aa37.21■■■■□ 3.55
CTDNEP1-206ENST00000571409 RHBDL3P58872 404 aa37.2■■■■□ 3.55
CTDNEP1-206ENST00000571409 ERC1Q8IUD2 1116 aa37.2■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms