RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TAF5LO75529 589 aa16.47■□□□□ 0.23
CCDC40-205ENST00000571028 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
CCDC40-205ENST00000571028 ATP8B2P98198 1209 aa16.47■□□□□ 0.23
CCDC40-205ENST00000571028 NR2E3Q9Y5X4 410 aa16.47■□□□□ 0.23
CCDC40-205ENST00000571028 TLR2O60603 784 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 ECM2O94769 699 aaPredicted RBP16.46■□□□□ 0.23
CCDC40-205ENST00000571028 CETPP11597 493 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 IL1R1P14778 569 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 SPDYE2Q495Y8 402 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 CEP85Q6P2H3 762 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.46■□□□□ 0.23
CCDC40-205ENST00000571028 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 ZNF70Q9UC06 446 aaPredicted RBP16.46■□□□□ 0.23
CCDC40-205ENST00000571028 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
CCDC40-205ENST00000571028 AOX1Q06278 1338 aa16.45■□□□□ 0.22
CCDC40-205ENST00000571028 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
CCDC40-205ENST00000571028 SNAP23O00161 211 aa16.45■□□□□ 0.22
CCDC40-205ENST00000571028 METTL24Q5JXM2 366 aa16.45■□□□□ 0.22
CCDC40-205ENST00000571028 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
CCDC40-205ENST00000571028 EXOC6Q8TAG9 804 aa16.45■□□□□ 0.22
CCDC40-205ENST00000571028 TDRD3Q9H7E2 651 aaKnown RBP16.45■□□□□ 0.22
CCDC40-205ENST00000571028 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
CCDC40-205ENST00000571028 EYA2O00167 538 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 HOXD10P28358 340 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 OS9Q13438 667 aaPredicted RBP16.44■□□□□ 0.22
CCDC40-205ENST00000571028 SNAPC2Q13487 334 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 MTX1Q13505 466 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 RAET1EQ8TD07 263 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 ZCCHC17Q9NP64 241 aaKnown RBP16.44■□□□□ 0.22
CCDC40-205ENST00000571028 SERPINA10Q9UK55 444 aa16.44■□□□□ 0.22
CCDC40-205ENST00000571028 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
CCDC40-205ENST00000571028 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 SZT2Q5T011 3432 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 MTFR1Q15390 333 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC40-205ENST00000571028 SHISA4Q96DD7 197 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 TMEM39BQ9GZU3 492 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 RIPOR2Q9Y4F9 1068 aa16.43■□□□□ 0.22
CCDC40-205ENST00000571028 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
CCDC40-205ENST00000571028 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
CCDC40-205ENST00000571028 G3BP1Q13283 466 aaKnown RBP eCLIP16.42■□□□□ 0.22
CCDC40-205ENST00000571028 ERO1BQ86YB8 467 aa16.42■□□□□ 0.22
CCDC40-205ENST00000571028 CDAN1Q8IWY9 1227 aa16.42■□□□□ 0.22
CCDC40-205ENST00000571028 CEP290O15078 2479 aa16.42■□□□□ 0.22
CCDC40-205ENST00000571028 BTBD19C9JJ37 291 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 APBB1O00213 710 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 GRK4P32298 578 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 UBXN2AP68543 259 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 POLA2Q14181 598 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
CCDC40-205ENST00000571028 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 HOOK2Q96ED9 719 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 TRIM47Q96LD4 638 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 TEPSINQ96N21 525 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 WRNIP1Q96S55 665 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 RNF208Q9H0X6 261 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 COPRSQ9NQ92 184 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 CEP126Q9P2H0 1117 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 SRRDQ9UH36 339 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 MROH5Q6ZUA9 1318 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
CCDC40-205ENST00000571028 OTOFQ9HC10 1997 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 HMMRO75330 724 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 GJB1P08034 283 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 CCL5P13501 91 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 PSMC4P43686 418 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 GJA8P48165 433 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 ATG9AQ7Z3C6 839 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 TMOD2Q9NZR1 351 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 EXOC6BQ9Y2D4 811 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
CCDC40-205ENST00000571028 A0A1W2PPC1 479 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 CIAO1O76071 339 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 FARP2O94887 1054 aaPredicted RBP16.39■□□□□ 0.21
CCDC40-205ENST00000571028 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
CCDC40-205ENST00000571028 CRKP46108 304 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 TFCP2Q12800 502 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 PPIL2Q13356 520 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 SIRT2Q8IXJ6 389 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 PCDHB15Q9Y5E8 787 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 SNCAIPQ9Y6H5 919 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 FAM205AQ6ZU69 1335 aa16.39■□□□□ 0.21
CCDC40-205ENST00000571028 IRF6O14896 467 aa16.38■□□□□ 0.21
CCDC40-205ENST00000571028 EVI5O60447 810 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 PDE8BO95263 885 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 OSBPP22059 807 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 HIBADHP31937 336 aaKnown RBP16.37■□□□□ 0.21
CCDC40-205ENST00000571028 DCAF15Q66K64 600 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
CCDC40-205ENST00000571028 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
CCDC40-205ENST00000571028 RANBP2P49792 3224 aaKnown RBP16.37■□□□□ 0.21
CCDC40-205ENST00000571028 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
CCDC40-205ENST00000571028 TDRD7Q8NHU6 1098 aaKnown RBP16.36■□□□□ 0.21
CCDC40-205ENST00000571028 U2AF1L4Q8WU68 220 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms