RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-207ENST00000570883 WBP1LQ9NX94 342 aa16.46■□□□□ 0.23
RPAIN-207ENST00000570883 RFX7Q2KHR2 1363 aa16.46■□□□□ 0.23
RPAIN-207ENST00000570883 MYH7P12883 1935 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 MAP2K2P36507 400 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 LDLRAD1Q5T700 205 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 FKBP1CQ5VVH2 108 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 SPTY2D1Q68D10 685 aaPredicted RBP16.45■□□□□ 0.22
RPAIN-207ENST00000570883 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
RPAIN-207ENST00000570883 RPAP1Q9BWH6 1393 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-207ENST00000570883 FOXN1O15353 648 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 RAB11FIP3O75154 756 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 CYP2E1P05181 493 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-207ENST00000570883 ZAP70P43403 619 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 NFIAQ12857 509 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 NOGQ13253 232 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 MAP3K11Q16584 847 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 FAM83AQ86UY5 434 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
RPAIN-207ENST00000570883 TMOD2Q9NZR1 351 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 ANGEL1Q9UNK9 670 aaKnown RBP16.44■□□□□ 0.22
RPAIN-207ENST00000570883 PCDHB15Q9Y5E8 787 aa16.44■□□□□ 0.22
RPAIN-207ENST00000570883 TNNI2P48788 182 aa16.43■□□□□ 0.22
RPAIN-207ENST00000570883 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-207ENST00000570883 ARMC9Q7Z3E5 817 aa16.43■□□□□ 0.22
RPAIN-207ENST00000570883 CCDC102AQ96A19 550 aa16.43■□□□□ 0.22
RPAIN-207ENST00000570883 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-207ENST00000570883 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
RPAIN-207ENST00000570883 RAI14Q9P0K7 980 aa16.43■□□□□ 0.22
RPAIN-207ENST00000570883 NDUFB9Q9Y6M9 179 aa16.43■□□□□ 0.22
RPAIN-207ENST00000570883 USP2O75604 605 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-207ENST00000570883 BTDP43251 543 aa16.42■□□□□ 0.22
RPAIN-207ENST00000570883 CLASRPQ8N2M8 674 aaKnown RBP16.42■□□□□ 0.22
RPAIN-207ENST00000570883 USP40Q9NVE5 1235 aa16.42■□□□□ 0.22
RPAIN-207ENST00000570883 FAM198AQ9UFP1 575 aa16.42■□□□□ 0.22
RPAIN-207ENST00000570883 SIPA1L1O43166 1804 aa16.42■□□□□ 0.22
RPAIN-207ENST00000570883 GPR75-ASB3A0A0A6YYF3 556 aa16.41■□□□□ 0.22
RPAIN-207ENST00000570883 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
RPAIN-207ENST00000570883 CLMNQ96JQ2 1002 aa16.41■□□□□ 0.22
RPAIN-207ENST00000570883 LRP2BPQ9P2M1 347 aa16.41■□□□□ 0.22
RPAIN-207ENST00000570883 CASP8AP2Q9UKL3 1982 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 SMARCA5O60264 1052 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-207ENST00000570883 WDHD1O75717 1129 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-207ENST00000570883 RHBDL3P58872 404 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 KIF23Q02241 960 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-207ENST00000570883 TCP10Q12799 353 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 ZFPM1Q8IX07 1006 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 FAM151AQ8WW52 585 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 AIDAQ96BJ3 306 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 DCTPP1Q9H773 170 aa16.4■□□□□ 0.22
RPAIN-207ENST00000570883 DDX4Q9NQI0 724 aaKnown RBP16.4■□□□□ 0.22
RPAIN-207ENST00000570883 MYH1P12882 1939 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 IFIT2P09913 472 aaKnown RBP16.39■□□□□ 0.21
RPAIN-207ENST00000570883 RGS3P49796 1198 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 GSTO1P78417 241 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 IDI2Q9BXS1 227 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
RPAIN-207ENST00000570883 ATRNL1Q5VV63 1379 aa16.38■□□□□ 0.21
RPAIN-207ENST00000570883 HSPA8P11142 646 aaKnown RBP16.38■□□□□ 0.21
RPAIN-207ENST00000570883 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
RPAIN-207ENST00000570883 ATAD5Q96QE3 1844 aa16.38■□□□□ 0.21
RPAIN-207ENST00000570883 LDHCP07864 332 aa16.37■□□□□ 0.21
RPAIN-207ENST00000570883 CTCFP49711 727 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-207ENST00000570883 MKRN3Q13064 507 aaKnown RBP16.37■□□□□ 0.21
RPAIN-207ENST00000570883 SPRYD7Q5W111 196 aa16.37■□□□□ 0.21
RPAIN-207ENST00000570883 NAA16Q6N069 864 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-207ENST00000570883 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.37■□□□□ 0.21
RPAIN-207ENST00000570883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.37■□□□□ 0.21
RPAIN-207ENST00000570883 CSRNP1Q96S65 589 aa16.37■□□□□ 0.21
RPAIN-207ENST00000570883 DOCK1Q14185 1865 aa16.37■□□□□ 0.21
RPAIN-207ENST00000570883 DDX60LQ5H9U9 1706 aaKnown RBP16.36■□□□□ 0.21
RPAIN-207ENST00000570883 PHIPQ8WWQ0 1821 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 UNCXA6NJT0 531 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 ENTPD3O75355 529 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
RPAIN-207ENST00000570883 GJA5P36382 358 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 COL13A1Q5TAT6 717 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-207ENST00000570883 SH3BP5LQ7L8J4 393 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 ANKRD13AQ8IZ07 590 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
RPAIN-207ENST00000570883 WNK4Q96J92 1243 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
RPAIN-207ENST00000570883 TSKSQ9UJT2 592 aa16.36■□□□□ 0.21
RPAIN-207ENST00000570883 NAV1Q8NEY1 1877 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 PTPRFP10586 1907 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 LBX1P52954 281 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 PICALMQ13492 652 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 VGLL4Q14135 290 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 MIGA2Q7L4E1 593 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
RPAIN-207ENST00000570883 SLC10A4Q96EP9 437 aa16.35■□□□□ 0.21
RPAIN-207ENST00000570883 EDC3Q96F86 508 aaKnown RBP16.35■□□□□ 0.21
RPAIN-207ENST00000570883 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms