RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MAST3O60307 1309 aa15.38■□□□□ 0.05
CTDNEP1-205ENST00000570828 SSC5DA1L4H1 1573 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 BCAR3O75815 825 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 HDLBPQ00341 1268 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 GRIK5Q16478 980 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 TEKT1Q969V4 418 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 ABHD8Q96I13 439 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 TDRD3Q9H7E2 651 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 PA2G4Q9UQ80 394 aaKnown RBP15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 ARAP2Q8WZ64 1704 aa15.37■□□□□ 0.05
CTDNEP1-205ENST00000570828 SRGAP3O43295 1099 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 SREBF2Q12772 1141 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 MKRN3Q13064 507 aaKnown RBP15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 LDLRAD1Q5T700 205 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 WDR66Q8TBY9 1149 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 COPRSQ9NQ92 184 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 GNL3LQ9NVN8 582 aaKnown RBP15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 FZD1Q9UP38 647 aa15.36■□□□□ 0.05
CTDNEP1-205ENST00000570828 TCP10L2B9ZVM9 353 aa15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 IREB2P48200 963 aaKnown RBP15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 TNNI2P48788 182 aa15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 MAP3K11Q16584 847 aa15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 NBPF12Q5TAG4 269 aaPredicted RBP15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 TMOD2Q9NZR1 351 aa15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.35■□□□□ 0.05
CTDNEP1-205ENST00000570828 GNAI2P04899 355 aa15.34■□□□□ 0.05
CTDNEP1-205ENST00000570828 MTX1Q13505 466 aa15.34■□□□□ 0.05
CTDNEP1-205ENST00000570828 SPRYD7Q5W111 196 aa15.34■□□□□ 0.05
CTDNEP1-205ENST00000570828 SLC10A4Q96EP9 437 aa15.34■□□□□ 0.05
CTDNEP1-205ENST00000570828 TNNQ9UQP3 1299 aa15.34■□□□□ 0.05
CTDNEP1-205ENST00000570828 UNCXA6NJT0 531 aa15.33■□□□□ 0.04
CTDNEP1-205ENST00000570828 DGKZQ13574 1117 aa15.33■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZDHHC15Q96MV8 337 aa15.33■□□□□ 0.04
CTDNEP1-205ENST00000570828 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.04
CTDNEP1-205ENST00000570828 SEMA3EO15041 775 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZBTB48P10074 688 aaPredicted RBP15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 PHKA1P46020 1223 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 TM4SF4P48230 202 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 FTSJ3Q8IY81 847 aaKnown RBP15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 ANKRD13AQ8IZ07 590 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 MRIQ9BWK5 157 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 TMEM39BQ9GZU3 492 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZBED9Q6R2W3 1325 aa15.32■□□□□ 0.04
CTDNEP1-205ENST00000570828 MANSC4A6NHS7 340 aaPredicted RBP15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 ADORA1P30542 326 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 CACNB3P54284 484 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 APOBEC3HQ6NTF7 200 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 TMEM57Q8N5G2 664 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 WNK4Q96J92 1243 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 TEPSINQ96N21 525 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 AKAP2Q9Y2D5 859 aa15.31■□□□□ 0.04
CTDNEP1-205ENST00000570828 USP2O75604 605 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 LDHBP07195 334 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 PRDX5P30044 214 aa15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 TFCP2Q12800 502 aa15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 CCDC102BQ68D86 513 aa15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 PDCD7Q8N8D1 485 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 TAOK2Q9UL54 1235 aa15.3■□□□□ 0.04
CTDNEP1-205ENST00000570828 SALL1Q9NSC2 1324 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 A0A1B0GUL7 405 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 CCDC85CA6NKD9 419 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 TBC1D8O95759 1140 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 PLCB2Q00722 1185 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 MVPQ14764 893 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 DIXDC1Q155Q3 683 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 FKBP1CQ5VVH2 108 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 FAM83AQ86UY5 434 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZGPATQ8N5A5 531 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 HOOK2Q96ED9 719 aa15.29■□□□□ 0.04
CTDNEP1-205ENST00000570828 ALDH1A1P00352 501 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 INHBEP58166 350 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 TIMM10P62072 90 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 RASGRF1Q13972 1273 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 CTU1Q7Z7A3 348 aaKnown RBP15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZNF467Q7Z7K2 595 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 ITPRIPQ8IWB1 547 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 ELP3Q9H9T3 547 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 DAGLAQ9Y4D2 1042 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 CSADQ9Y600 493 aa15.28■□□□□ 0.04
CTDNEP1-205ENST00000570828 RPAP1Q9BWH6 1393 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 PDS5AQ29RF7 1337 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 PNMA6EA0A0J9YXQ4 647 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 G3BP1Q13283 466 aaKnown RBP eCLIP15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 VGLL4Q14135 290 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 GORABQ5T7V8 394 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 DZIP1Q86YF9 867 aaKnown RBP15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 ZNF296Q8WUU4 475 aaPredicted RBP15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 OPTNQ96CV9 577 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 XAGE2Q96GT9 111 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 NEUROD6Q96NK8 337 aa15.27■□□□□ 0.04
CTDNEP1-205ENST00000570828 CASP8AP2Q9UKL3 1982 aa15.27■□□□□ 0.03
CTDNEP1-205ENST00000570828 AKAP11Q9UKA4 1901 aa15.27■□□□□ 0.03
CTDNEP1-205ENST00000570828 GPR25O00155 361 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms