RNA–Protein interactions for RNA: ENST00000570626.1

RBFOX1-221, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5

Gene RBFOX1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-221ENST00000570626 LRFN3Q9BTN0 628 aa12.56□□□□□ -0.4
RBFOX1-221ENST00000570626 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
RBFOX1-221ENST00000570626 TIMELESSQ9UNS1 1208 aa12.56□□□□□ -0.4
RBFOX1-221ENST00000570626 DOCK3Q8IZD9 2030 aa12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 SMAD3P84022 425 aaKnown RBP12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 PPATQ06203 517 aa12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 SHHQ15465 462 aa12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
RBFOX1-221ENST00000570626 HMGCRP04035 888 aa12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 GPAT2Q6NUI2 795 aa12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 HMX1Q9NP08 348 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 THEGQ9P2T0 379 aa12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 JAG2Q9Y219 1238 aa12.54□□□□□ -0.4
RBFOX1-221ENST00000570626 PCCAP05165 728 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-221ENST00000570626 GRIN2CQ14957 1233 aa12.53□□□□□ -0.4
RBFOX1-221ENST00000570626 NECAB3Q96P71 396 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-221ENST00000570626 MYH3P11055 1940 aa12.52□□□□□ -0.4
RBFOX1-221ENST00000570626 TNNI2P48788 182 aa12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 CTSWP56202 376 aa12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 FKBP1AP62942 108 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 KRT24Q2M2I5 525 aa12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 GREM2Q9H772 168 aa12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 XIRP2A4UGR9 3374 aa12.52□□□□□ -0.41
RBFOX1-221ENST00000570626 SNAP23O00161 211 aa12.51□□□□□ -0.41
RBFOX1-221ENST00000570626 INPP5BP32019 993 aa12.51□□□□□ -0.41
RBFOX1-221ENST00000570626 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
RBFOX1-221ENST00000570626 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
RBFOX1-221ENST00000570626 PPM1EQ8WY54 764 aa12.51□□□□□ -0.41
RBFOX1-221ENST00000570626 CACNB3P54284 484 aa12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 DZIP1LQ8IYY4 767 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 COA7Q96BR5 231 aa12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 A0A1B0GUL6 1792 aa12.5□□□□□ -0.41
RBFOX1-221ENST00000570626 REV3LO60673 3130 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 IL1R1P14778 569 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 MRE11P49959 708 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 P2RX7Q99572 595 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 EPHX3Q9H6B9 360 aa12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 TCF20Q9UGU0 1960 aaKnown RBP12.49□□□□□ -0.41
RBFOX1-221ENST00000570626 PLXNB2O15031 1838 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 KCNJ4P48050 445 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 HDGFL1Q5TGJ6 251 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 CCDC191Q8NCU4 936 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 IL27Q8NEV9 243 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 MYD88Q99836 296 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 ANKRD2Q9GZV1 360 aa12.48□□□□□ -0.41
RBFOX1-221ENST00000570626 ZEB1P37275 1124 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 TMEM31Q5JXX7 168 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 RIC3Q7Z5B4 369 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 TRIB2Q92519 343 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 PCGF6Q9BYE7 350 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 ZNF341Q9BYN7 854 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 CWC25Q9NXE8 425 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 TTF2Q9UNY4 1162 aaKnown RBP12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 CHD9Q3L8U1 2897 aa12.47□□□□□ -0.41
RBFOX1-221ENST00000570626 NEFMP07197 916 aa12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 IGHMBP2P38935 993 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 CRKP46108 304 aa12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 C15orf52Q6ZUT6 534 aaKnown RBP12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 MIGA2Q7L4E1 593 aa12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 BABAM1Q9NWV8 329 aa12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-221ENST00000570626 PTPRFP10586 1907 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 PRKAR2AP13861 404 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 CHRNDQ07001 517 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 LHX8Q68G74 356 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 ZNF804AQ7Z570 1209 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 ANKRD13CQ8N6S4 541 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 SMCR8Q8TEV9 937 aaPredicted RBP12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 PRKAG2Q9UGJ0 569 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 GJD2Q9UKL4 321 aa12.45□□□□□ -0.42
RBFOX1-221ENST00000570626 RPAP1Q9BWH6 1393 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 A0A0G2JLL6 359 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 CXCL11O14625 94 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 DNAJB2P25686 324 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 MFSD14BQ5SR56 506 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 NOL9Q5SY16 702 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 GADL1Q6ZQY3 521 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 PRRT2Q7Z6L0 340 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 SENP6Q9GZR1 1112 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 ZNF112Q9UJU3 913 aa12.44□□□□□ -0.42
RBFOX1-221ENST00000570626 SLC45A1Q9Y2W3 748 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms