RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 WWC1Q8IX03 1113 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 DNAAF4Q8WXU2 420 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 MXD3Q9BW11 206 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 ANKRD2Q9GZV1 360 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 COA1Q9GZY4 146 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 RNF186Q9NXI6 227 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 RABGEF1Q9UJ41 708 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 LEMD3Q9Y2U8 911 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 ZNF804BA4D1E1 1349 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 IL16Q14005 1332 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 FANCIQ9NVI1 1328 aa8.27□□□□□ -1.09
SMG6-204ENST00000570606 WTIPA6NIX2 430 aaPredicted RBP8.26□□□□□ -1.09
SMG6-204ENST00000570606 H7C1W4 665 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 KLRK1P26718 216 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 GCKRQ14397 625 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 NBPF9Q3BBW0 867 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 PRAMEF18Q5VWM3 479 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 DMRTA1Q5VZB9 504 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 MOB2Q70IA6 237 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 APOBEC3FQ8IUX4 373 aaKnown RBP8.26□□□□□ -1.09
SMG6-204ENST00000570606 KIAA0825Q8IV33 1275 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 CSRNP1Q96S65 589 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 PLA2G12BQ9BX93 195 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 MRS2Q9HD23 443 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 HDAC9Q9UKV0 1011 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 ARAP2Q8WZ64 1704 aa8.26□□□□□ -1.09
SMG6-204ENST00000570606 COL1A1P02452 1464 aaPredicted RBP8.26□□□□□ -1.09
SMG6-204ENST00000570606 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 UBE2Q2LH0YL09 131 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 WNT10BO00744 389 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 SPTLC1O15269 473 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 CHRNDQ07001 517 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 CCDC184Q52MB2 194 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 PPP2R2DQ66LE6 453 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 TTLL5Q6EMB2 1281 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 CTU1Q7Z7A3 348 aaKnown RBP8.25□□□□□ -1.09
SMG6-204ENST00000570606 TXNRD3Q86VQ6 643 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 LINS1Q8NG48 757 aa8.25□□□□□ -1.09
SMG6-204ENST00000570606 SALL2Q9Y467 1007 aaPredicted RBP8.25□□□□□ -1.09
SMG6-204ENST00000570606 MOXD2PA6NHM9 499 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 GJA5P36382 358 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 PBX2P40425 430 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 RFC5P40937 340 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 RGS19P49795 217 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 MMP14P50281 582 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 SOX10P56693 466 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 GTF2IP78347 998 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 IFIT5Q13325 482 aaKnown RBP8.24□□□□□ -1.09
SMG6-204ENST00000570606 PRKG1Q13976 671 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 TAF7LQ5H9L4 462 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 ARMC9Q7Z3E5 817 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 ZNF804AQ7Z570 1209 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 OTOFQ9HC10 1997 aa8.24□□□□□ -1.09
SMG6-204ENST00000570606 TNRC18O15417 2968 aaPredicted RBP8.23□□□□□ -1.09
SMG6-204ENST00000570606 A6NJR5 290 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 ANP32CO43423 234 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 CSF1RP07333 972 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 EMP3P54852 163 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 CASP7P55210 303 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 SREBF2Q12772 1141 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 DLGAP5Q15398 846 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
SMG6-204ENST00000570606 RDH13Q8NBN7 331 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
SMG6-204ENST00000570606 MARVELD3Q96A59 401 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 CLUAP1Q96AJ1 413 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 SEPT9Q9UHD8 586 aaPredicted RBP8.23□□□□□ -1.09
SMG6-204ENST00000570606 VPS9D1Q9Y2B5 631 aa8.23□□□□□ -1.09
SMG6-204ENST00000570606 LAMB1P07942 1786 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 F6X3S4 739 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 F8W031 263 aaPredicted RBP8.22□□□□□ -1.09
SMG6-204ENST00000570606 SNAP23O00161 211 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 MYO1BO43795 1136 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 TAF5LO75529 589 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 TBC1D8O95759 1140 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 NDUFV2P19404 249 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 GCGRP47871 477 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 EXOSC9Q06265 439 aaKnown RBP8.22□□□□□ -1.09
SMG6-204ENST00000570606 CCDC57Q2TAC2 916 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 ZNF687Q8N1G0 1237 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 ZNF296Q8WUU4 475 aaPredicted RBP8.22□□□□□ -1.09
SMG6-204ENST00000570606 C1orf115Q9H7X2 142 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 VEZTQ9HBM0 779 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 CD209Q9NNX6 404 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 ANGEL1Q9UNK9 670 aaKnown RBP8.22□□□□□ -1.09
SMG6-204ENST00000570606 MYH13Q9UKX3 1938 aa8.22□□□□□ -1.09
SMG6-204ENST00000570606 SPDYE5A6NIY4 337 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 PLIN1O60240 522 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 KDM4AO75164 1064 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 VAMP4O75379 141 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 PTPN12Q05209 780 aaKnown RBP8.21□□□□□ -1.1
SMG6-204ENST00000570606 CFAP100Q494V2 611 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 WDR63Q8IWG1 891 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 BANK1Q8NDB2 785 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 DEFB129Q9H1M3 183 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 CNNM1Q9NRU3 951 aa8.21□□□□□ -1.1
SMG6-204ENST00000570606 C9orf78Q9NZ63 289 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms