RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 WDR43Q15061 677 aaKnown RBP eCLIP13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 MIGA2Q7L4E1 593 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 ZNF594Q96JF6 807 aaPredicted RBP13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 CRISPLD2Q9H0B8 497 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 KCNH4Q9UQ05 1017 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 PTPRFP10586 1907 aa13.33□□□□□ -0.28
CTDNEP1-202ENST00000570380 CYP2C8P10632 490 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 CAPN2P17655 700 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 FLT3LGP49771 235 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 LRIT3Q3SXY7 679 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 FAM83AQ86UY5 434 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 DIS3LQ8TF46 1054 aaKnown RBP13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 FAM84BQ96KN1 310 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 STK31Q9BXU1 1019 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 ZNF341Q9BYN7 854 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 PAK6Q9NQU5 681 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 CHMP3Q9Y3E7 222 aa13.32□□□□□ -0.28
CTDNEP1-202ENST00000570380 EYSQ5T1H1 3165 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 DDX60LQ5H9U9 1706 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 CALD1Q05682 793 aaKnown RBP13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 DCAF15Q66K64 600 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 GPAT2Q6NUI2 795 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 C7orf61Q8IZ16 206 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 PXYLP1Q8TE99 480 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
CTDNEP1-202ENST00000570380 APAF1O14727 1248 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 UBE4AQ14139 1066 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 FKBP1CQ5VVH2 108 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 TEKT1Q969V4 418 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 PARK7Q99497 189 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 CNNM1Q9NRU3 951 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 ZNF112Q9UJU3 913 aa13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 MYBBP1AQ9BQG0 1328 aaKnown RBP13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 RPAP1Q9BWH6 1393 aaPredicted RBP13.3□□□□□ -0.28
CTDNEP1-202ENST00000570380 SPTBN5Q9NRC6 3674 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 MYH13Q9UKX3 1938 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 SYN1P17600 705 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 IRF5Q13568 498 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 APOBEC3HQ6NTF7 200 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 LMBR1LQ6UX01 489 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 TDHQ8IZJ6 230 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 ZDHHC15Q96MV8 337 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 TMOD2Q9NZR1 351 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 IQSEC3Q9UPP2 1182 aaPredicted RBP13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 PHIPQ8WWQ0 1821 aa13.29□□□□□ -0.28
CTDNEP1-202ENST00000570380 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-202ENST00000570380 FLIIQ13045 1269 aa13.28□□□□□ -0.28
CTDNEP1-202ENST00000570380 CHAF1AQ13111 956 aaPredicted RBP13.28□□□□□ -0.28
CTDNEP1-202ENST00000570380 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
CTDNEP1-202ENST00000570380 TNPO2O14787 897 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 FBXO33Q7Z6M2 555 aa13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 MRIQ9BWK5 157 aa13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 DOCK2Q92608 1830 aa13.27□□□□□ -0.29
CTDNEP1-202ENST00000570380 CXCL11O14625 94 aa13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 TWISTNBQ3B726 338 aaPredicted RBP13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 NOL9Q5SY16 702 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 TBC1D22AQ8WUA7 517 aa13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 PUS3Q9BZE2 481 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 UBE2OQ9C0C9 1292 aaKnown RBP13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 TAOK2Q9UL54 1235 aa13.26□□□□□ -0.29
CTDNEP1-202ENST00000570380 PLXNB2O15031 1838 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 PRUNE2Q8WUY3 3088 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 FAM151AQ8WW52 585 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 GUCD1Q96NT3 240 aa13.25□□□□□ -0.29
CTDNEP1-202ENST00000570380 A0A0G2JLL6 359 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 TCP10Q12799 353 aa13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 PRRT2Q7Z6L0 340 aaPredicted RBP13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 VPS37DQ86XT2 251 aa13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 NBPF3Q9H094 633 aa13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 DOCK1Q14185 1865 aa13.24□□□□□ -0.29
CTDNEP1-202ENST00000570380 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 FRAT2O75474 233 aaPredicted RBP13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 BEND3Q5T5X7 828 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 FASTKD5Q7L8L6 764 aaKnown RBP13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 COA7Q96BR5 231 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 PRDM6Q9NQX0 595 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 SLC45A1Q9Y2W3 748 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
CTDNEP1-202ENST00000570380 MAST3O60307 1309 aa13.22□□□□□ -0.29
CTDNEP1-202ENST00000570380 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
CTDNEP1-202ENST00000570380 F6X3S4 739 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms