RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
GCOM1-213ENST00000569945 SEC31AO94979 1220 aaKnown RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 TTC31Q49AM3 519 aaPredicted RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 SLC10A5Q5PT55 438 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 TSHZ3Q63HK5 1081 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 E4F1Q66K89 784 aaPredicted RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 TTLL11Q8NHH1 800 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 DDX19AQ9NUU7 478 aaKnown RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 COL4A1P02462 1669 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 PDE8AO60658 829 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 CAVIN2O95810 425 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 CTSWP56202 376 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 ATP8B2P98198 1209 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 SMC1AQ14683 1233 aaKnown RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 RABL6Q3YEC7 729 aaPredicted RBP16.33■□□□□ 0.2
GCOM1-213ENST00000569945 PLA2G12BQ9BX93 195 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 GREM2Q9H772 168 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 TOMM22Q9NS69 142 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.2
GCOM1-213ENST00000569945 NRXN2Q9P2S2 1712 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 SRGAP3O43295 1099 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 LARGE1O95461 756 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 GJB2P29033 226 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 ACTN2P35609 894 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
GCOM1-213ENST00000569945 PA2G4Q9UQ80 394 aaKnown RBP16.32■□□□□ 0.2
GCOM1-213ENST00000569945 CSF1RP07333 972 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 PTGER2P43116 358 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 SLC51AQ86UW1 340 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 ZNF594Q96JF6 807 aaPredicted RBP16.31■□□□□ 0.2
GCOM1-213ENST00000569945 PPP1R13BQ96KQ4 1090 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 DRC1Q96MC2 740 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 TAF1P21675 1872 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 ADAM21Q9UKJ8 722 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 CEP83Q9Y592 693 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 SNX14Q9Y5W7 946 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 LAMB2P55268 1798 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 ANKRD31Q8N7Z5 1873 aa16.31■□□□□ 0.2
GCOM1-213ENST00000569945 TADA3O75528 432 aa16.3■□□□□ 0.2
GCOM1-213ENST00000569945 CCDC172P0C7W6 258 aa16.3■□□□□ 0.2
GCOM1-213ENST00000569945 KRT85P78386 507 aa16.3■□□□□ 0.2
GCOM1-213ENST00000569945 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
GCOM1-213ENST00000569945 UBXN4Q92575 508 aa16.3■□□□□ 0.2
GCOM1-213ENST00000569945 TUBB4AP04350 444 aa16.3■□□□□ 0.2
GCOM1-213ENST00000569945 RFX5P48382 616 aaPredicted RBP16.3■□□□□ 0.2
GCOM1-213ENST00000569945 GSCP56915 257 aaPredicted RBP16.3■□□□□ 0.2
GCOM1-213ENST00000569945 CC2D1AQ6P1N0 951 aaPredicted RBP16.3■□□□□ 0.2
GCOM1-213ENST00000569945 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
GCOM1-213ENST00000569945 MTX1Q13505 466 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 SWT1Q5T5J6 900 aaKnown RBP16.29■□□□□ 0.2
GCOM1-213ENST00000569945 SUGP1Q8IWZ8 645 aaKnown RBP16.29■□□□□ 0.2
GCOM1-213ENST00000569945 MYH3P11055 1940 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 POLA2Q14181 598 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
GCOM1-213ENST00000569945 SSH3Q8TE77 659 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 NLRP3Q96P20 1036 aa16.29■□□□□ 0.2
GCOM1-213ENST00000569945 ITGA6P23229 1130 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 KCNJ6P48051 423 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 ST3GAL1Q11201 340 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 OSBPL5Q9H0X9 879 aaPredicted RBP16.28■□□□□ 0.2
GCOM1-213ENST00000569945 HMMRO75330 724 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 IVLP07476 585 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 LMAN1P49257 510 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 SART3Q15020 963 aaKnown RBP16.28■□□□□ 0.2
GCOM1-213ENST00000569945 EP400NLQ6ZTU2 488 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 SIL1Q9H173 461 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
GCOM1-213ENST00000569945 CHRNA5P30532 468 aa16.27■□□□□ 0.2
GCOM1-213ENST00000569945 PTPN12Q05209 780 aaKnown RBP16.27■□□□□ 0.2
GCOM1-213ENST00000569945 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
GCOM1-213ENST00000569945 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
GCOM1-213ENST00000569945 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
GCOM1-213ENST00000569945 GPATCH11Q8N954 259 aa16.27■□□□□ 0.2
GCOM1-213ENST00000569945 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
GCOM1-213ENST00000569945 PUS3Q9BZE2 481 aaKnown RBP16.27■□□□□ 0.2
GCOM1-213ENST00000569945 PHLPP2Q6ZVD8 1323 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 VPS37CA5D8V6 355 aaPredicted RBP16.27■□□□□ 0.19
GCOM1-213ENST00000569945 EFCAB8A8MWE9 144 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 DTNBO60941 627 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 NR1I2O75469 434 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 GSDMDP57764 484 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 C11orf57Q6ZUT1 292 aaPredicted RBP16.27■□□□□ 0.19
GCOM1-213ENST00000569945 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 FUT8Q9BYC5 575 aa16.27■□□□□ 0.19
GCOM1-213ENST00000569945 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
GCOM1-213ENST00000569945 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
GCOM1-213ENST00000569945 TPM1P09493 284 aa16.26■□□□□ 0.19
GCOM1-213ENST00000569945 POLD1P28340 1107 aa16.26■□□□□ 0.19
GCOM1-213ENST00000569945 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
GCOM1-213ENST00000569945 EIF3CQ99613 913 aaKnown RBP16.26■□□□□ 0.19
GCOM1-213ENST00000569945 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.26■□□□□ 0.19
GCOM1-213ENST00000569945 H3BQF6 201 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 CPP00450 1065 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 CCDC152Q4G0S7 254 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 FAM173BQ6P4H8 233 aa16.25■□□□□ 0.19
GCOM1-213ENST00000569945 NBPF11Q86T75 865 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms