RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 MAN1A2O60476 641 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 PDGFAP04085 211 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 IER5Q5VY09 327 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 LRRC69Q6ZNQ3 347 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 GPAMQ9HCL2 828 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 DMGDHQ9UI17 866 aaKnown RBP8.43□□□□□ -1.06
UBFD1-209ENST00000569919 DYRK1BQ9Y463 629 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 KTN1Q86UP2 1357 aaKnown RBP8.43□□□□□ -1.06
UBFD1-209ENST00000569919 ANKRD36BQ8N2N9 1353 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 PIK3C2AO00443 1686 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
UBFD1-209ENST00000569919 OPLAHO14841 1288 aa8.42□□□□□ -1.06
UBFD1-209ENST00000569919 COL13A1Q5TAT6 717 aaPredicted RBP8.42□□□□□ -1.06
UBFD1-209ENST00000569919 ZCRB1Q8TBF4 217 aaKnown RBP8.42□□□□□ -1.06
UBFD1-209ENST00000569919 GAS2L1Q99501 681 aaPredicted RBP8.42□□□□□ -1.06
UBFD1-209ENST00000569919 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
UBFD1-209ENST00000569919 USP47Q96K76 1375 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 IGSF1Q8N6C5 1336 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 SOBPA7XYQ1 873 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 TREHO43280 583 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 IGHA2P01877 340 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 F11P03951 625 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 ZNF16P17020 682 aaPredicted RBP8.41□□□□□ -1.06
UBFD1-209ENST00000569919 USP5P45974 858 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 IDH3AP50213 366 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 PRELPP51888 382 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 BTLAQ7Z6A9 289 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.41□□□□□ -1.06
UBFD1-209ENST00000569919 GJD3Q8N144 294 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 JMYQ8N9B5 988 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 GIPC2Q8TF65 315 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 IP6K1Q92551 441 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 DMRTB1Q96MA1 342 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 FAM129BQ96TA1 746 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 CRISPLD1Q9H336 500 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 RUBCNLQ9H714 662 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 FAM13BQ9NYF5 915 aa8.41□□□□□ -1.06
UBFD1-209ENST00000569919 QRICH2Q9H0J4 1663 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 NFAT5O94916 1531 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 PCSK2P16519 638 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 COL19A1Q14993 1142 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 FBXO33Q7Z6M2 555 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 PGBD3Q8N328 593 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 PIK3R5Q8WYR1 880 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
UBFD1-209ENST00000569919 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 GPR182O15218 404 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 INPP5BP32019 993 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 PLCB3Q01970 1234 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 DSC3Q14574 896 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 NME9Q86XW9 330 aa8.39□□□□□ -1.07
UBFD1-209ENST00000569919 C16orf71Q8IYS4 520 aaPredicted RBP8.39□□□□□ -1.07
UBFD1-209ENST00000569919 E9PSI1 815 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 P4HBP07237 508 aaKnown RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 ARSDP51689 593 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 TAGLNQ01995 201 aaKnown RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 EHHADHQ08426 723 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 FSTL1Q12841 308 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 C8orf34Q49A92 452 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 EAPPQ56P03 285 aaPredicted RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 HDGFL2Q7Z4V5 671 aaPredicted RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 LTV1Q96GA3 475 aaPredicted RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 IRX2Q9BZI1 471 aaPredicted RBP8.38□□□□□ -1.07
UBFD1-209ENST00000569919 NIF3L1Q9GZT8 377 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 GGNBP2Q9H3C7 697 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 USP20Q9Y2K6 914 aa8.38□□□□□ -1.07
UBFD1-209ENST00000569919 LY75O60449 1722 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 NSD2O96028 1365 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 CGNL1Q0VF96 1302 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 TGFB2P61812 414 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 PTSQ03393 145 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 FMR1Q06787 632 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBFD1-209ENST00000569919 NLRP8Q86W28 1048 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 TTC16Q8NEE8 873 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 SMARCC1Q92922 1105 aaPredicted RBP8.37□□□□□ -1.07
UBFD1-209ENST00000569919 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
UBFD1-209ENST00000569919 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 WWC3Q9ULE0 1092 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 RTCBQ9Y3I0 505 aaKnown RBP8.37□□□□□ -1.07
UBFD1-209ENST00000569919 TUBGCP6Q96RT7 1819 aa8.37□□□□□ -1.07
UBFD1-209ENST00000569919 SLC35F4A4IF30 521 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 A6NHS1 94 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 RPLP1P05386 114 aaKnown RBP8.36□□□□□ -1.07
UBFD1-209ENST00000569919 TYRO3Q06418 890 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 EFHC2Q5JST6 749 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 RIPOR1Q6ZS17 1223 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 ARHGAP27Q6ZUM4 889 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 CMTR1Q8N1G2 835 aaKnown RBP8.36□□□□□ -1.07
UBFD1-209ENST00000569919 SENP2Q9HC62 589 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 NMRK2Q9NPI5 230 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 TERF2IPQ9NYB0 399 aa8.36□□□□□ -1.07
UBFD1-209ENST00000569919 MAPK8P45983 427 aa8.35□□□□□ -1.07
UBFD1-209ENST00000569919 AMPHP49418 695 aa8.35□□□□□ -1.07
UBFD1-209ENST00000569919 RAPGEF4Q8WZA2 1011 aa8.35□□□□□ -1.07
UBFD1-209ENST00000569919 KIFC2Q96AC6 838 aa8.35□□□□□ -1.07
UBFD1-209ENST00000569919 NSD3Q9BZ95 1437 aa8.35□□□□□ -1.07
UBFD1-209ENST00000569919 EPB42P16452 691 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms