RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 ZSCAN29Q8IWY8 852 aaPredicted RBP8.05□□□□□ -1.12
GDE1-204ENST00000569773 COL25A1Q9BXS0 654 aaPredicted RBP8.05□□□□□ -1.12
GDE1-204ENST00000569773 GSX2Q9BZM3 304 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 BTG4Q9NY30 223 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 WNK3Q9BYP7 1800 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 RREB1Q92766 1687 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 CAMTA1Q9Y6Y1 1673 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 RGPD5Q99666 1765 aa8.05□□□□□ -1.12
GDE1-204ENST00000569773 SPATA31A5Q5VU36 1347 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 SPATA31A7Q8IWB4 1347 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 PARP4Q9UKK3 1724 aaKnown RBP8.04□□□□□ -1.12
GDE1-204ENST00000569773 C2CD2LO14523 706 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 SASH3O75995 380 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 EGFRP00533 1210 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 PDE3BQ13370 1112 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 RNFT1Q5M7Z0 435 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 KRT27Q7Z3Y8 459 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 ZNF438Q7Z4V0 828 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 DEFB132Q7Z7B7 95 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 PIK3C2AO00443 1686 aa8.04□□□□□ -1.12
GDE1-204ENST00000569773 DISP2A7MBM2 1401 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 KIAA0232Q92628 1395 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 ANKRD33BA6NCL7 494 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 IGHA2P01877 340 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 BMP4P12644 408 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 TARSP26639 723 aaKnown RBP8.03□□□□□ -1.12
GDE1-204ENST00000569773 EHHADHQ08426 723 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 BHMTQ93088 406 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 PNMA5Q96PV4 448 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 C11orf16Q9NQ32 467 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 MBIPQ9NS73 344 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 PEAK1Q9H792 1746 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 USP19O94966 1318 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 ACEP12821 1306 aa8.03□□□□□ -1.12
GDE1-204ENST00000569773 NFKB1P19838 968 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 LCE2CQ5TA81 110 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 PDE12Q6L8Q7 609 aaKnown RBP8.02□□□□□ -1.13
GDE1-204ENST00000569773 NLRP13Q86W25 1043 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 ZSCAN1Q8NBB4 408 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 NGDNQ8NEJ9 315 aaKnown RBP8.02□□□□□ -1.13
GDE1-204ENST00000569773 DMRTB1Q96MA1 342 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 ELP3Q9H9T3 547 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 TMEM63CQ9P1W3 806 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 ZFATQ9P243 1243 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.02□□□□□ -1.13
GDE1-204ENST00000569773 NUP188Q5SRE5 1749 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 SLIT3O75094 1523 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 SSH2Q76I76 1423 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 SPATA31A1Q5TZJ5 1347 aa8.02□□□□□ -1.13
GDE1-204ENST00000569773 CPDO75976 1380 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 RARAP10276 462 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 KRT76Q01546 638 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 NBPF8Q3BBV2 869 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 NIF3L1Q9GZT8 377 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 FOXD3Q9UJU5 478 aaPredicted RBP8.01□□□□□ -1.13
GDE1-204ENST00000569773 USP54Q70EL1 1684 aa8.01□□□□□ -1.13
GDE1-204ENST00000569773 MON2Q7Z3U7 1717 aa8□□□□□ -1.13
GDE1-204ENST00000569773 RGPD3A6NKT7 1758 aaPredicted RBP8□□□□□ -1.13
GDE1-204ENST00000569773 RGPD4Q7Z3J3 1758 aa8□□□□□ -1.13
GDE1-204ENST00000569773 TREHO43280 583 aa8□□□□□ -1.13
GDE1-204ENST00000569773 PCBP4P57723 403 aaKnown RBP8□□□□□ -1.13
GDE1-204ENST00000569773 NEUROD1Q13562 356 aa8□□□□□ -1.13
GDE1-204ENST00000569773 XKR5Q6UX68 686 aa8□□□□□ -1.13
GDE1-204ENST00000569773 CNTNAP3BQ96NU0 1288 aa8□□□□□ -1.13
GDE1-204ENST00000569773 CNTNAP3Q9BZ76 1288 aa8□□□□□ -1.13
GDE1-204ENST00000569773 PRDM11Q9NQV5 511 aa8□□□□□ -1.13
GDE1-204ENST00000569773 ABI2Q9NYB9 513 aaPredicted RBP8□□□□□ -1.13
GDE1-204ENST00000569773 PPIP5K1Q6PFW1 1433 aa8□□□□□ -1.13
GDE1-204ENST00000569773 LRRC37A3O60309 1634 aa8□□□□□ -1.13
GDE1-204ENST00000569773 MMP20O60882 483 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 TNFRSF21O75509 655 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 USP6P35125 1406 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 C1QTNF8P60827 252 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 ORC1Q13415 861 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 CHRNA2Q15822 529 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 ZNF468Q5VIY5 522 aaPredicted RBP7.99□□□□□ -1.13
GDE1-204ENST00000569773 SYT9Q86SS6 491 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 NPAS4Q8IUM7 802 aa7.99□□□□□ -1.13
GDE1-204ENST00000569773 ALKBH8Q96BT7 664 aaKnown RBP7.99□□□□□ -1.13
GDE1-204ENST00000569773 NSFL1CQ9UNZ2 370 aaKnown RBP7.99□□□□□ -1.13
GDE1-204ENST00000569773 COL5A2P05997 1499 aaPredicted RBP7.99□□□□□ -1.13
GDE1-204ENST00000569773 CENPJQ9HC77 1338 aaPredicted RBP7.99□□□□□ -1.13
GDE1-204ENST00000569773 BRD4O60885 1362 aaPredicted RBP7.98□□□□□ -1.13
GDE1-204ENST00000569773 ERCC3P19447 782 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 GMPRP36959 345 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 MAP2K3P46734 347 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 ZC3H6P61129 1189 aaKnown RBP7.98□□□□□ -1.13
GDE1-204ENST00000569773 PLCB3Q01970 1234 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 DSC3Q14574 896 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
GDE1-204ENST00000569773 NUTM2GQ5VZR2 741 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 EFCC1Q9HA90 598 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 CNTN3Q9P232 1028 aa7.98□□□□□ -1.13
GDE1-204ENST00000569773 PHACTR2O75167 634 aa7.97□□□□□ -1.13
GDE1-204ENST00000569773 P4HBP07237 508 aaKnown RBP7.97□□□□□ -1.13
GDE1-204ENST00000569773 MAPK8P45983 427 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms