RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ZAP70P43403 619 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 ERC1Q8IUD2 1116 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 USP40Q9NVE5 1235 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 TMOD2Q9NZR1 351 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 TSKSQ9UJT2 592 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 DAGLAQ9Y4D2 1042 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 PCDHB15Q9Y5E8 787 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 MAST3O60307 1309 aa11.06□□□□□ -0.64
GTF3C1-210ENST00000569394 SEMA3EO15041 775 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 IFIT2P09913 472 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 UQCRFS1P1P0C7P4 283 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 MECOMQ03112 1051 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 PICALMQ13492 652 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 HSP90AB4PQ58FF6 505 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 APOBEC3HQ6NTF7 200 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 CDC42EP5Q6NZY7 148 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 CLASRPQ8N2M8 674 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 EXOC6Q8TAG9 804 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 BBXQ8WY36 941 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 KIF1BPQ96EK5 621 aa11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 DNAJC2Q99543 621 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 MYO5AQ9Y4I1 1855 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-210ENST00000569394 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 ECE1P42892 770 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 NFIAQ12857 509 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 SPTY2D1Q68D10 685 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 RGMBQ6NW40 437 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 HHIPL2Q6UWX4 724 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 MIGA2Q7L4E1 593 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 ZDHHC15Q96MV8 337 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 PIH1D3Q9NQM4 214 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-210ENST00000569394 IDH1O75874 414 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 CYP2E1P05181 493 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 SLURP2P0DP57 97 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 BTDP43251 543 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 TNNI2P48788 182 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 MMP14P50281 582 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 HDLBPQ00341 1268 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 SLC4A8Q2Y0W8 1093 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 TSHZ3Q63HK5 1081 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 ZFPM1Q8IX07 1006 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 EDC3Q96F86 508 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 CLMNQ96JQ2 1002 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 SUGT1Q9Y2Z0 365 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 SALL1Q9NSC2 1324 aa11.03□□□□□ -0.64
GTF3C1-210ENST00000569394 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 TNFAIP1Q13829 316 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 SUPT20HL1Q3ZLR7 823 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 NAA16Q6N069 864 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 ZNF384Q8TF68 577 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 AIDAQ96BJ3 306 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 NSUN4Q96CB9 384 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 BOLA2Q9H3K6 86 aa11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 AATFQ9NY61 560 aaKnown RBP eCLIP11.02□□□□□ -0.65
GTF3C1-210ENST00000569394 AKAP11Q9UKA4 1901 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 GOLIM4O00461 696 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 FOXN1O15353 648 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 PPP1R12BO60237 982 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 MAP4K4O95819 1239 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 CYP7A1P22680 504 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 DYNLL1P63167 89 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 SLFNL1Q499Z3 407 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 RASAL3Q86YV0 1011 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 MAGEB6Q8N7X4 407 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 MIGA1Q8NAN2 632 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 ELP3Q9H9T3 547 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 SSC5DA1L4H1 1573 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 MROH7-TTC4A0A0A0MT08 1334 aa11.01□□□□□ -0.65
GTF3C1-210ENST00000569394 PAPPA2Q9BXP8 1791 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
GTF3C1-210ENST00000569394 RGS3P49796 1198 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 GSTO1P78417 241 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 ADGRA1Q86SQ6 560 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 SLF2Q8IX21 1173 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 SH3RF3Q8TEJ3 882 aaPredicted RBP11□□□□□ -0.65
GTF3C1-210ENST00000569394 SLC10A4Q96EP9 437 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 TEPSINQ96N21 525 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 NOL10Q9BSC4 688 aaKnown RBP11□□□□□ -0.65
GTF3C1-210ENST00000569394 BEGAINQ9BUH8 593 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 FAM198AQ9UFP1 575 aa11□□□□□ -0.65
GTF3C1-210ENST00000569394 FAM196BA6NMK8 535 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 CHGBP05060 677 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 LDHCP07864 332 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 IREB2P48200 963 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 LBX1P52954 281 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 ANKRD45Q5TZF3 282 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 TEX11Q8IYF3 940 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 OTUD7AQ8TE49 926 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 ZKSCAN4Q969J2 545 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 CCDC102AQ96A19 550 aa10.99□□□□□ -0.65
GTF3C1-210ENST00000569394 MRIQ9BWK5 157 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms