RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CYP2E1P05181 493 aaPredicted RBP19.42■□□□□ 0.7
USB1-215ENST00000569252 USP17L8P0C7I0 530 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 GSTO1P78417 241 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 NOGQ13253 232 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 ZSCAN25Q6NSZ9 544 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 RGMBQ6NW40 437 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 PI16Q6UXB8 463 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 TBC1D9Q6ZT07 1266 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 MOB2Q70IA6 237 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 KIAA0825Q8IV33 1275 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 PI4K2BQ8TCG2 481 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 TTF2Q9UNY4 1162 aaKnown RBP19.42■□□□□ 0.7
USB1-215ENST00000569252 MAST3O60307 1309 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 SALL3Q9BXA9 1300 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 PDE4DIPQ5VU43 2346 aa19.42■□□□□ 0.7
USB1-215ENST00000569252 TRPA1O75762 1119 aa19.41■□□□□ 0.7
USB1-215ENST00000569252 IDH1O75874 414 aaKnown RBP19.41■□□□□ 0.7
USB1-215ENST00000569252 MAP4K4O95819 1239 aaPredicted RBP19.41■□□□□ 0.7
USB1-215ENST00000569252 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
USB1-215ENST00000569252 KIF4BQ2VIQ3 1234 aa19.41■□□□□ 0.7
USB1-215ENST00000569252 RILPL2Q969X0 211 aa19.41■□□□□ 0.7
USB1-215ENST00000569252 MXD3Q9BW11 206 aa19.41■□□□□ 0.7
USB1-215ENST00000569252 NDUFB9Q9Y6M9 179 aa19.41■□□□□ 0.7
USB1-215ENST00000569252 CA12O43570 354 aa19.4■□□□□ 0.7
USB1-215ENST00000569252 LDHCP07864 332 aa19.4■□□□□ 0.7
USB1-215ENST00000569252 RBM5P52756 815 aaKnown RBP eCLIP19.4■□□□□ 0.7
USB1-215ENST00000569252 EVI5LQ96CN4 794 aa19.4■□□□□ 0.7
USB1-215ENST00000569252 RNF186Q9NXI6 227 aa19.4■□□□□ 0.7
USB1-215ENST00000569252 DCPSQ96C86 337 aaKnown RBP19.39■□□□□ 0.69
USB1-215ENST00000569252 CDCA5Q96FF9 252 aa19.39■□□□□ 0.69
USB1-215ENST00000569252 NOL10Q9BSC4 688 aaKnown RBP19.39■□□□□ 0.69
USB1-215ENST00000569252 TTC22Q5TAA0 569 aa19.38■□□□□ 0.69
USB1-215ENST00000569252 PRAMEF18Q5VWM3 479 aa19.38■□□□□ 0.69
USB1-215ENST00000569252 NAA16Q6N069 864 aaPredicted RBP19.38■□□□□ 0.69
USB1-215ENST00000569252 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
USB1-215ENST00000569252 CERS5Q8N5B7 392 aa19.38■□□□□ 0.69
USB1-215ENST00000569252 FSD1Q9BTV5 496 aa19.38■□□□□ 0.69
USB1-215ENST00000569252 ANTXR1Q9H6X2 564 aa19.38■□□□□ 0.69
USB1-215ENST00000569252 ANGEL2Q5VTE6 544 aaKnown RBP19.37■□□□□ 0.69
USB1-215ENST00000569252 C2orf69Q8N8R5 385 aa19.37■□□□□ 0.69
USB1-215ENST00000569252 TEKT1Q969V4 418 aa19.37■□□□□ 0.69
USB1-215ENST00000569252 GMLQ99445 158 aa19.37■□□□□ 0.69
USB1-215ENST00000569252 MRIQ9BWK5 157 aa19.37■□□□□ 0.69
USB1-215ENST00000569252 PIH1D3Q9NQM4 214 aaKnown RBP19.37■□□□□ 0.69
USB1-215ENST00000569252 SERPINA10Q9UK55 444 aa19.37■□□□□ 0.69
USB1-215ENST00000569252 SLC10A3P09131 477 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 PRDX5P30044 214 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 HDLBPQ00341 1268 aaKnown RBP19.36■□□□□ 0.69
USB1-215ENST00000569252 MECOMQ03112 1051 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 DLGAP5Q15398 846 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 SLC9C2Q5TAH2 1124 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 KBTBD3Q8NAB2 608 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 EDC3Q96F86 508 aaKnown RBP19.36■□□□□ 0.69
USB1-215ENST00000569252 CSRNP1Q96S65 589 aa19.36■□□□□ 0.69
USB1-215ENST00000569252 AKAP11Q9UKA4 1901 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 MYO1BO43795 1136 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 BAG3O95817 575 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 ZFYP08048 801 aaPredicted RBP19.35■□□□□ 0.69
USB1-215ENST00000569252 TICAM2Q86XR7 235 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 RASAL3Q86YV0 1011 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 MAGEB6Q8N7X4 407 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 MYOZ2Q9NPC6 264 aa19.35■□□□□ 0.69
USB1-215ENST00000569252 MYH13Q9UKX3 1938 aa19.34■□□□□ 0.69
USB1-215ENST00000569252 HIP1O00291 1037 aa19.34■□□□□ 0.69
USB1-215ENST00000569252 CRKP46108 304 aa19.34■□□□□ 0.69
USB1-215ENST00000569252 HHIPL2Q6UWX4 724 aa19.34■□□□□ 0.69
USB1-215ENST00000569252 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
USB1-215ENST00000569252 NSUN4Q96CB9 384 aaKnown RBP19.34■□□□□ 0.69
USB1-215ENST00000569252 COL1A1P02452 1464 aaPredicted RBP19.34■□□□□ 0.69
USB1-215ENST00000569252 CYP7A1P22680 504 aa19.33■□□□□ 0.68
USB1-215ENST00000569252 ZNF280AP59817 542 aaPredicted RBP19.33■□□□□ 0.68
USB1-215ENST00000569252 MKRN3Q13064 507 aaKnown RBP19.33■□□□□ 0.68
USB1-215ENST00000569252 GRIK5Q16478 980 aa19.33■□□□□ 0.68
USB1-215ENST00000569252 CFAP100Q494V2 611 aa19.33■□□□□ 0.68
USB1-215ENST00000569252 SKAP1Q86WV1 359 aa19.33■□□□□ 0.68
USB1-215ENST00000569252 RNF113AO15541 343 aaKnown RBP19.32■□□□□ 0.68
USB1-215ENST00000569252 PSME4Q14997 1843 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 UBE2Q2LH0YL09 131 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 PDE6AP16499 860 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 SDSP20132 328 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 DIXDC1Q155Q3 683 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 BMP2KLQ5H9B9 411 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 CASC1Q6TDU7 716 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 CERS3Q8IU89 383 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 CCDC102AQ96A19 550 aa19.31■□□□□ 0.68
USB1-215ENST00000569252 FAM163AQ96GL9 167 aaPredicted RBP19.31■□□□□ 0.68
USB1-215ENST00000569252 ZNF532Q9HCE3 1301 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 PLCG2P16885 1265 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 ADD2P35612 726 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 MTMR14Q8NCE2 650 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 DIAPH3Q9NSV4 1193 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
USB1-215ENST00000569252 ZNF646O15015 1829 aaPredicted RBP19.3■□□□□ 0.68
USB1-215ENST00000569252 MROH7-TTC4A0A0A0MT08 1334 aa19.29■□□□□ 0.68
USB1-215ENST00000569252 TBC1D8O95759 1140 aa19.29■□□□□ 0.68
USB1-215ENST00000569252 GSPT1P15170 499 aaKnown RBP19.29■□□□□ 0.68
USB1-215ENST00000569252 NBPF9Q3BBW0 867 aa19.29■□□□□ 0.68
USB1-215ENST00000569252 SAGE1Q9NXZ1 904 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms