RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 LMOD1P29536 600 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-219ENST00000569136 CXCL9Q07325 125 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 TAF7LQ5H9L4 462 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 PPP1R18Q6NYC8 613 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 ATF7IPQ6VMQ6 1270 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 LDHAL6AQ6ZMR3 332 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 PNMA8AQ86V59 439 aaPredicted RBP11.51□□□□□ -0.57
CAPN3-219ENST00000569136 SMC1BQ8NDV3 1235 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 HACL1Q9UJ83 578 aa11.51□□□□□ -0.57
CAPN3-219ENST00000569136 RABL6Q3YEC7 729 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-219ENST00000569136 EPHA10Q5JZY3 1008 aa11.5□□□□□ -0.57
CAPN3-219ENST00000569136 INTS3Q68E01 1043 aaKnown RBP11.5□□□□□ -0.57
CAPN3-219ENST00000569136 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
CAPN3-219ENST00000569136 TAF1DQ9H5J8 278 aaPredicted RBP11.5□□□□□ -0.57
CAPN3-219ENST00000569136 GJA3Q9Y6H8 435 aa11.5□□□□□ -0.57
CAPN3-219ENST00000569136 BRCA1P38398 1863 aaKnown RBP11.5□□□□□ -0.57
CAPN3-219ENST00000569136 BCAR3O75815 825 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 GNAI3P08754 354 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 TMEM259Q4ZIN3 620 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 DPF2Q92785 391 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 KAZALD1Q96I82 304 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 SUCLG2Q96I99 432 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.49□□□□□ -0.57
CAPN3-219ENST00000569136 ZNF541Q9H0D2 1346 aa11.49□□□□□ -0.57
CAPN3-219ENST00000569136 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
CAPN3-219ENST00000569136 UBTFL1P0CB47 393 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-219ENST00000569136 RPS12P25398 132 aaKnown RBP11.48□□□□□ -0.57
CAPN3-219ENST00000569136 EPHX2P34913 555 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 KCNJ4P48050 445 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 MMP14P50281 582 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 CTDSPL2Q05D32 466 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 CHRNDQ07001 517 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 LDHDQ86WU2 507 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
CAPN3-219ENST00000569136 BICC1Q9H694 974 aaKnown RBP11.48□□□□□ -0.57
CAPN3-219ENST00000569136 CNNM1Q9NRU3 951 aa11.48□□□□□ -0.57
CAPN3-219ENST00000569136 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 DLEC1Q9Y238 1755 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 H7C1D1 291 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 ECE2O60344 883 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 RAD17O75943 681 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 VIL1P09327 827 aaKnown RBP11.47□□□□□ -0.57
CAPN3-219ENST00000569136 TRIM27P14373 513 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 HSPA6P17066 643 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 MMP16P51512 607 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 C15orf52Q6ZUT6 534 aaKnown RBP11.47□□□□□ -0.57
CAPN3-219ENST00000569136 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
CAPN3-219ENST00000569136 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 COA1Q9GZY4 146 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 DBNDD1Q9H9R9 158 aa11.47□□□□□ -0.57
CAPN3-219ENST00000569136 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
CAPN3-219ENST00000569136 MROH5Q6ZUA9 1318 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 YDJCA8MPS7 323 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 RNF223E7ERA6 249 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 UBE4AQ14139 1066 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 DESI1Q6ICB0 168 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 ANKRD44Q8N8A2 993 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 NUDT12Q9BQG2 462 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 ADARB2Q9NS39 739 aaKnown RBP11.46□□□□□ -0.57
CAPN3-219ENST00000569136 GPRC5DQ9NZD1 345 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 RIPOR2Q9Y4F9 1068 aa11.46□□□□□ -0.57
CAPN3-219ENST00000569136 USP17L3A6NCW0 530 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 USP17L4A6NCW7 530 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 PSMD14O00487 310 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 CTHP32929 405 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 EPS15P42566 896 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 GMPSP49915 693 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-219ENST00000569136 SCNN1DP51172 638 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 USP17L1Q7RTZ2 530 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 AGBL3Q8NEM8 1001 aa11.45□□□□□ -0.58
CAPN3-219ENST00000569136 ZNF594Q96JF6 807 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-219ENST00000569136 CNOT7Q9UIV1 285 aaKnown RBP11.45□□□□□ -0.58
CAPN3-219ENST00000569136 COL11A2P13942 1736 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-219ENST00000569136 TNRC6CQ9HCJ0 1690 aaKnown RBP11.45□□□□□ -0.58
CAPN3-219ENST00000569136 GNAI2P04899 355 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 CCNYL3P0C7X3 344 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 PTPRNQ16849 979 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 EAPPQ56P03 285 aaPredicted RBP11.44□□□□□ -0.58
CAPN3-219ENST00000569136 STRIP1Q5VSL9 837 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 LYPD8Q6UX82 237 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 FTSJ3Q8IY81 847 aaKnown RBP11.44□□□□□ -0.58
CAPN3-219ENST00000569136 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
CAPN3-219ENST00000569136 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
CAPN3-219ENST00000569136 MED23Q9ULK4 1368 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 EYA2O00167 538 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 PLIN1O60240 522 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 TAF5LO75529 589 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 ZNF804AQ7Z570 1209 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 LRRN4Q8WUT4 740 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 CLUAP1Q96AJ1 413 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 GPR101Q96P66 508 aaPredicted RBP11.43□□□□□ -0.58
CAPN3-219ENST00000569136 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
CAPN3-219ENST00000569136 KCNQ5Q9NR82 932 aa11.43□□□□□ -0.58
CAPN3-219ENST00000569136 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
CAPN3-219ENST00000569136 ARFGEF2Q9Y6D5 1785 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms