RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 ARID4AP29374 1257 aaPredicted RBP31.13■■■□□ 2.57
CCNF-205ENST00000569093 C20orf194Q5TEA3 1177 aa31.13■■■□□ 2.57
CCNF-205ENST00000569093 TBC1D9Q6ZT07 1266 aa31.13■■■□□ 2.57
CCNF-205ENST00000569093 USP40Q9NVE5 1235 aa31.13■■■□□ 2.57
CCNF-205ENST00000569093 MCAMP43121 646 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 TM4SF4P48230 202 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 SPTY2D1Q68D10 685 aaPredicted RBP31.12■■■□□ 2.57
CCNF-205ENST00000569093 DZIP1Q86YF9 867 aaKnown RBP31.12■■■□□ 2.57
CCNF-205ENST00000569093 ANKRD13AQ8IZ07 590 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 WNK4Q96J92 1243 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 DDX19BQ9UMR2 479 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 EXOC6BQ9Y2D4 811 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 OTOFQ9HC10 1997 aa31.12■■■□□ 2.57
CCNF-205ENST00000569093 UNCXA6NJT0 531 aa31.11■■■□□ 2.57
CCNF-205ENST00000569093 NFIAQ12857 509 aa31.11■■■□□ 2.57
CCNF-205ENST00000569093 ZBTB40Q9NUA8 1239 aa31.11■■■□□ 2.57
CCNF-205ENST00000569093 UQCRFS1P1P0C7P4 283 aa31.1■■■□□ 2.57
CCNF-205ENST00000569093 TCP10Q12799 353 aa31.1■■■□□ 2.57
CCNF-205ENST00000569093 ERICH6Q7L0X2 663 aa31.1■■■□□ 2.57
CCNF-205ENST00000569093 SNRKQ9NRH2 765 aa31.1■■■□□ 2.57
CCNF-205ENST00000569093 GAKO14976 1311 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 MECOMQ03112 1051 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 TTC39AQ5SRH9 613 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.09■■■□□ 2.57
CCNF-205ENST00000569093 ZNF384Q8TF68 577 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 FAM151AQ8WW52 585 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 CCDC8Q9H0W5 538 aaPredicted RBP31.09■■■□□ 2.57
CCNF-205ENST00000569093 ELP3Q9H9T3 547 aa31.09■■■□□ 2.57
CCNF-205ENST00000569093 GJA5P36382 358 aa31.08■■■□□ 2.57
CCNF-205ENST00000569093 EAF2Q96CJ1 260 aaPredicted RBP31.08■■■□□ 2.57
CCNF-205ENST00000569093 TLR7Q9NYK1 1049 aaKnown RBP31.08■■■□□ 2.57
CCNF-205ENST00000569093 FAM198AQ9UFP1 575 aa31.08■■■□□ 2.57
CCNF-205ENST00000569093 MAP3K9P80192 1104 aa31.07■■■□□ 2.56
CCNF-205ENST00000569093 SREBF2Q12772 1141 aa31.07■■■□□ 2.56
CCNF-205ENST00000569093 CCDC158Q5M9N0 1113 aa31.07■■■□□ 2.56
CCNF-205ENST00000569093 ZFPM1Q8IX07 1006 aa31.07■■■□□ 2.56
CCNF-205ENST00000569093 SIRT2Q8IXJ6 389 aa31.07■■■□□ 2.56
CCNF-205ENST00000569093 FAM163AQ96GL9 167 aaPredicted RBP31.07■■■□□ 2.56
CCNF-205ENST00000569093 DBNLQ9UJU6 430 aaKnown RBP31.07■■■□□ 2.56
CCNF-205ENST00000569093 AK9Q5TCS8 1911 aa31.06■■■□□ 2.56
CCNF-205ENST00000569093 TBC1D8O95759 1140 aa31.06■■■□□ 2.56
CCNF-205ENST00000569093 ZBTB48P10074 688 aaPredicted RBP31.06■■■□□ 2.56
CCNF-205ENST00000569093 MIGA2Q7L4E1 593 aa31.06■■■□□ 2.56
CCNF-205ENST00000569093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.06■■■□□ 2.56
CCNF-205ENST00000569093 VGLL4Q14135 290 aa31.05■■■□□ 2.56
CCNF-205ENST00000569093 SLF2Q8IX21 1173 aa31.05■■■□□ 2.56
CCNF-205ENST00000569093 RPAP2Q8IXW5 612 aaPredicted RBP31.05■■■□□ 2.56
CCNF-205ENST00000569093 CNKSR2Q8WXI2 1034 aa31.05■■■□□ 2.56
CCNF-205ENST00000569093 RAI14Q9P0K7 980 aa31.05■■■□□ 2.56
CCNF-205ENST00000569093 RPAP1Q9BWH6 1393 aaPredicted RBP31.05■■■□□ 2.56
CCNF-205ENST00000569093 MROH7-TTC4A0A0A0MT08 1334 aa31.04■■■□□ 2.56
CCNF-205ENST00000569093 BTDP43251 543 aa31.04■■■□□ 2.56
CCNF-205ENST00000569093 PDE3AQ14432 1141 aa31.04■■■□□ 2.56
CCNF-205ENST00000569093 NSUN4Q96CB9 384 aaKnown RBP31.04■■■□□ 2.56
CCNF-205ENST00000569093 MANSC4A6NHS7 340 aaPredicted RBP31.03■■■□□ 2.56
CCNF-205ENST00000569093 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.03■■■□□ 2.56
CCNF-205ENST00000569093 OPTNQ96CV9 577 aa31.03■■■□□ 2.56
CCNF-205ENST00000569093 LRP2BPQ9P2M1 347 aa31.03■■■□□ 2.56
CCNF-205ENST00000569093 RGS3P49796 1198 aa31.02■■■□□ 2.56
CCNF-205ENST00000569093 HOOK2Q96ED9 719 aa31.02■■■□□ 2.56
CCNF-205ENST00000569093 WRNIP1Q96S55 665 aa31.02■■■□□ 2.56
CCNF-205ENST00000569093 GPR75-ASB3A0A0A6YYF3 556 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 INHBEP58166 350 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 ERC1Q8IUD2 1116 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 ZKSCAN4Q969J2 545 aaPredicted RBP31.01■■■□□ 2.55
CCNF-205ENST00000569093 ZNF512BQ96KM6 892 aaPredicted RBP31.01■■■□□ 2.55
CCNF-205ENST00000569093 IDI2Q9BXS1 227 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 IL1RAPL2Q9NP60 686 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 CSADQ9Y600 493 aa31.01■■■□□ 2.55
CCNF-205ENST00000569093 APBB1O00213 710 aa31■■■□□ 2.55
CCNF-205ENST00000569093 CYP2E1P05181 493 aaPredicted RBP31■■■□□ 2.55
CCNF-205ENST00000569093 ZAP70P43403 619 aa31■■■□□ 2.55
CCNF-205ENST00000569093 DCAF15Q66K64 600 aa31■■■□□ 2.55
CCNF-205ENST00000569093 IFNL1Q8IU54 200 aa31■■■□□ 2.55
CCNF-205ENST00000569093 R3HDMLQ9H3Y0 253 aa31■■■□□ 2.55
CCNF-205ENST00000569093 CHMP4BQ9H444 224 aaKnown RBP31■■■□□ 2.55
CCNF-205ENST00000569093 IGF2BP3O00425 579 aaKnown RBP eCLIP30.99■■■□□ 2.55
CCNF-205ENST00000569093 WDHD1O75717 1129 aaPredicted RBP30.99■■■□□ 2.55
CCNF-205ENST00000569093 LDHCP07864 332 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 RHBDL3P58872 404 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 GSTO1P78417 241 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 HSP90AB4PQ58FF6 505 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 AACSQ86V21 672 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 RHPN1Q8TCX5 695 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 ZNF341Q9BYN7 854 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 DDX4Q9NQI0 724 aaKnown RBP30.99■■■□□ 2.55
CCNF-205ENST00000569093 SNCAIPQ9Y6H5 919 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 LAMB1P07942 1786 aa30.99■■■□□ 2.55
CCNF-205ENST00000569093 MYO5AQ9Y4I1 1855 aaKnown RBP30.99■■■□□ 2.55
CCNF-205ENST00000569093 HMMRO75330 724 aa30.98■■■□□ 2.55
CCNF-205ENST00000569093 ENTPD3O75355 529 aa30.98■■■□□ 2.55
CCNF-205ENST00000569093 ABHD8Q96I13 439 aa30.98■■■□□ 2.55
CCNF-205ENST00000569093 YTHDC1Q96MU7 727 aaKnown RBP30.98■■■□□ 2.55
CCNF-205ENST00000569093 MCOLN1Q9GZU1 580 aa30.98■■■□□ 2.55
CCNF-205ENST00000569093 RFX7Q2KHR2 1363 aa30.97■■■□□ 2.55
CCNF-205ENST00000569093 INPP5BP32019 993 aa30.97■■■□□ 2.55
CCNF-205ENST00000569093 PICALMQ13492 652 aa30.97■■■□□ 2.55
CCNF-205ENST00000569093 DGKZQ13574 1117 aa30.97■■■□□ 2.55
CCNF-205ENST00000569093 SH3BP5LQ7L8J4 393 aa30.97■■■□□ 2.55
CCNF-205ENST00000569093 OTUD5Q96G74 571 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms