RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 PDE3AQ14432 1141 aa21.56■■□□□ 1.04
EDC3-215ENST00000569007 REM2Q8IYK8 340 aaPredicted RBP21.56■■□□□ 1.04
EDC3-215ENST00000569007 MCAMP43121 646 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 SPRYD7Q5W111 196 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 TBC1D9Q6ZT07 1266 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 USP40Q9NVE5 1235 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 RNF186Q9NXI6 227 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 GAKO14976 1311 aa21.55■■□□□ 1.04
EDC3-215ENST00000569007 UNCXA6NJT0 531 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 TRPA1O75762 1119 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 CCDC158Q5M9N0 1113 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 TTC39AQ5SRH9 613 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 ERICH6Q7L0X2 663 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 RPAP2Q8IXW5 612 aaPredicted RBP21.54■■□□□ 1.04
EDC3-215ENST00000569007 CHMP4BQ9H444 224 aaKnown RBP21.54■■□□□ 1.04
EDC3-215ENST00000569007 SAGE1Q9NXZ1 904 aa21.54■■□□□ 1.04
EDC3-215ENST00000569007 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
EDC3-215ENST00000569007 MECOMQ03112 1051 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 NFIAQ12857 509 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 ERC1Q8IUD2 1116 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 SLF2Q8IX21 1173 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 SIRT2Q8IXJ6 389 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 ANKRD13AQ8IZ07 590 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 EAF2Q96CJ1 260 aaPredicted RBP21.53■■□□□ 1.04
EDC3-215ENST00000569007 CCDC8Q9H0W5 538 aaPredicted RBP21.53■■□□□ 1.04
EDC3-215ENST00000569007 SNRKQ9NRH2 765 aa21.53■■□□□ 1.04
EDC3-215ENST00000569007 TLR7Q9NYK1 1049 aaKnown RBP21.53■■□□□ 1.04
EDC3-215ENST00000569007 HMMRO75330 724 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 TCP10Q12799 353 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 ZNF384Q8TF68 577 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 FAM151AQ8WW52 585 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 FAM163AQ96GL9 167 aaPredicted RBP21.52■■□□□ 1.04
EDC3-215ENST00000569007 WNK4Q96J92 1243 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 YTHDC1Q96MU7 727 aaKnown RBP21.52■■□□□ 1.04
EDC3-215ENST00000569007 MYH2Q9UKX2 1941 aa21.52■■□□□ 1.04
EDC3-215ENST00000569007 RPAP1Q9BWH6 1393 aaPredicted RBP21.51■■□□□ 1.03
EDC3-215ENST00000569007 HSP90AB4PQ58FF6 505 aa21.51■■□□□ 1.03
EDC3-215ENST00000569007 RAI14Q9P0K7 980 aa21.51■■□□□ 1.03
EDC3-215ENST00000569007 FAM198AQ9UFP1 575 aa21.51■■□□□ 1.03
EDC3-215ENST00000569007 MROH7-TTC4A0A0A0MT08 1334 aa21.51■■□□□ 1.03
EDC3-215ENST00000569007 AKAP11Q9UKA4 1901 aa21.51■■□□□ 1.03
EDC3-215ENST00000569007 TM4SF4P48230 202 aa21.5■■□□□ 1.03
EDC3-215ENST00000569007 MAP3K9P80192 1104 aa21.5■■□□□ 1.03
EDC3-215ENST00000569007 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.5■■□□□ 1.03
EDC3-215ENST00000569007 NSUN4Q96CB9 384 aaKnown RBP21.5■■□□□ 1.03
EDC3-215ENST00000569007 HOOK2Q96ED9 719 aa21.5■■□□□ 1.03
EDC3-215ENST00000569007 ZNF512BQ96KM6 892 aaPredicted RBP21.5■■□□□ 1.03
EDC3-215ENST00000569007 OTOFQ9HC10 1997 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 ZBTB48P10074 688 aaPredicted RBP21.49■■□□□ 1.03
EDC3-215ENST00000569007 BTDP43251 543 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 SREBF2Q12772 1141 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 AACSQ86V21 672 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.49■■□□□ 1.03
EDC3-215ENST00000569007 RHPN1Q8TCX5 695 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 ELP3Q9H9T3 547 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 LRP2BPQ9P2M1 347 aa21.49■■□□□ 1.03
EDC3-215ENST00000569007 GPR75-ASB3A0A0A6YYF3 556 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 APBB1O00213 710 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 GJA5P36382 358 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 RGS3P49796 1198 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 GSTO1P78417 241 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 VGLL4Q14135 290 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 ZFPM1Q8IX07 1006 aa21.48■■□□□ 1.03
EDC3-215ENST00000569007 CASP8AP2Q9UKL3 1982 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 MANSC4A6NHS7 340 aaPredicted RBP21.47■■□□□ 1.03
EDC3-215ENST00000569007 CYP2E1P05181 493 aaPredicted RBP21.47■■□□□ 1.03
EDC3-215ENST00000569007 LDHCP07864 332 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 ZAP70P43403 619 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 DCAF15Q66K64 600 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 MIGA2Q7L4E1 593 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 WRNIP1Q96S55 665 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 IDI2Q9BXS1 227 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 CSADQ9Y600 493 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 RFX7Q2KHR2 1363 aa21.47■■□□□ 1.03
EDC3-215ENST00000569007 WDHD1O75717 1129 aaPredicted RBP21.46■■□□□ 1.03
EDC3-215ENST00000569007 CNKSR2Q8WXI2 1034 aa21.46■■□□□ 1.03
EDC3-215ENST00000569007 OPTNQ96CV9 577 aa21.46■■□□□ 1.03
EDC3-215ENST00000569007 KIF1BPQ96EK5 621 aa21.46■■□□□ 1.03
EDC3-215ENST00000569007 ENTPD3O75355 529 aa21.45■■□□□ 1.02
EDC3-215ENST00000569007 TBC1D8O95759 1140 aa21.45■■□□□ 1.02
EDC3-215ENST00000569007 RHBDL3P58872 404 aa21.45■■□□□ 1.02
EDC3-215ENST00000569007 ZNF341Q9BYN7 854 aa21.45■■□□□ 1.02
EDC3-215ENST00000569007 PIH1D3Q9NQM4 214 aaKnown RBP21.45■■□□□ 1.02
EDC3-215ENST00000569007 INHBEP58166 350 aa21.44■■□□□ 1.02
EDC3-215ENST00000569007 CLASRPQ8N2M8 674 aaKnown RBP21.44■■□□□ 1.02
EDC3-215ENST00000569007 ZKSCAN4Q969J2 545 aaPredicted RBP21.44■■□□□ 1.02
EDC3-215ENST00000569007 DDX4Q9NQI0 724 aaKnown RBP21.44■■□□□ 1.02
EDC3-215ENST00000569007 SNCAIPQ9Y6H5 919 aa21.44■■□□□ 1.02
EDC3-215ENST00000569007 RAB11FIP3O75154 756 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 CAPN15O75808 1086 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 PICALMQ13492 652 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 NAA16Q6N069 864 aaPredicted RBP21.43■■□□□ 1.02
EDC3-215ENST00000569007 SH3BP5LQ7L8J4 393 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 ZSCAN29Q8IWY8 852 aaPredicted RBP21.43■■□□□ 1.02
EDC3-215ENST00000569007 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
EDC3-215ENST00000569007 IGF2BP3O00425 579 aaKnown RBP eCLIP21.42■■□□□ 1.02
EDC3-215ENST00000569007 INPP5BP32019 993 aa21.42■■□□□ 1.02
EDC3-215ENST00000569007 IFNL1Q8IU54 200 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms