RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	MANSC4	A6NHS7	340 aa	Predicted RBP	12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	USP2	O75604	605 aa	Predicted RBP	12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	ALDH1A1	P00352	501 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	ZBTB48	P10074	688 aa	Predicted RBP	12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	TNNI3K	Q59H18	835 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	APOBEC3H	Q6NTF7	200 aa	Known RBP	12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	SPATA5	Q8NB90	893 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	ZIC5	Q96T25	663 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	USP40	Q9NVE5	1235 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	RNF186	Q9NXI6	227 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	RAI14	Q9P0K7	980 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	LRP2BP	Q9P2M1	347 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	COG6	Q9Y2V7	657 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	FPGT-TNNI3K	V9GXZ4	949 aa		12.72	□□□□□ -0.37
UBR1-207	ENST00000568782	WDHD1	O75717	1129 aa	Predicted RBP	12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	CACNB3	P54284	484 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	MAP3K9	P80192	1104 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	PDE3A	Q14432	1141 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	DIXDC1	Q155Q3	683 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	SPRYD7	Q5W111	196 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	CEP85	Q6P2H3	762 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	NOP58	Q9Y2X3	529 aa	Known RBP	12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	DAGLA	Q9Y4D2	1042 aa		12.71	□□□□□ -0.37
UBR1-207	ENST00000568782	CAPN15	O75808	1086 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	ARID4A	P29374	1257 aa	Predicted RBP	12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	TM4SF4	P48230	202 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	TCP10	Q12799	353 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	CDC42EP5	Q6NZY7	148 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	FAM151A	Q8WW52	585 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	HMG20B	Q9P0W2	317 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	FZD1	Q9UP38	647 aa		12.7	□□□□□ -0.38
UBR1-207	ENST00000568782	AOX1	Q06278	1338 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	IGSF3	O75054	1194 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	BAG3	O95817	575 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	MAP4K4	O95819	1239 aa	Predicted RBP	12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	CLASRP	Q8N2M8	674 aa	Known RBP	12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	FAM163A	Q96GL9	167 aa	Predicted RBP	12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	WNK4	Q96J92	1243 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	ZNF341	Q9BYN7	854 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	ELP3	Q9H9T3	547 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	EXOC6B	Q9Y2D4	811 aa		12.69	□□□□□ -0.38
UBR1-207	ENST00000568782	PLCG2	P16885	1265 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	BTD	P43251	543 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	MECOM	Q03112	1051 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	OPTN	Q96CV9	577 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	CLMN	Q96JQ2	1002 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	TEPSIN	Q96N21	525 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	WRNIP1	Q96S55	665 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	DBNDD2	Q9BQY9	259 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	BCL11A	Q9H165	835 aa		12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	RPAP1	Q9BWH6	1393 aa	Predicted RBP	12.68	□□□□□ -0.38
UBR1-207	ENST00000568782	MROH7-TTC4	A0A0A0MT08	1334 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	APBB1	O00213	710 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	RAB11FIP3	O75154	756 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	ENTPD3	O75355	529 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	IFIT2	P09913	472 aa	Known RBP	12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	MCAM	P43121	646 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	DGKZ	Q13574	1117 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	NAA16	Q6N069	864 aa	Predicted RBP	12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	MIGA2	Q7L4E1	593 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	AACS	Q86V21	672 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	KIF1BP	Q96EK5	621 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	ZBTB40	Q9NUA8	1239 aa		12.67	□□□□□ -0.38
UBR1-207	ENST00000568782	GAK	O14976	1311 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	SSC5D	A1L4H1	1573 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	TBC1D8	O95759	1140 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	RGS3	P49796	1198 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	GTF2A2	P52657	109 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	PICALM	Q13492	652 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	TBC1D9	Q6ZT07	1266 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	ERO1B	Q86YB8	467 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	IFNL1	Q8IU54	200 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	YTHDC1	Q96MU7	727 aa	Known RBP	12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	IDI2	Q9BXS1	227 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	SNRK	Q9NRH2	765 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	OTOF	Q9HC10	1997 aa		12.66	□□□□□ -0.38
UBR1-207	ENST00000568782	GPR75-ASB3	A0A0A6YYF3	556 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	VGLL4	Q14135	290 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	TTF1	Q15361	905 aa	Predicted RBP	12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	PI16	Q6UXB8	463 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	CERS3	Q8IU89	383 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	RHPN1	Q8TCX5	695 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	NSUN4	Q96CB9	384 aa	Known RBP	12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	OTUD5	Q96G74	571 aa		12.65	□□□□□ -0.38
UBR1-207	ENST00000568782	DOCK2	Q92608	1830 aa		12.65	□□□□□ -0.39
UBR1-207	ENST00000568782	CETP	P11597	493 aa		12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	MAP3K12	Q12852	859 aa		12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	NFIA	Q12857	509 aa		12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	TMED8	Q6PL24	325 aa	Predicted RBP	12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	ZKSCAN4	Q969J2	545 aa	Predicted RBP	12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	EAF2	Q96CJ1	260 aa	Predicted RBP	12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	TRIM34	Q9BYJ4	488 aa		12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	IL1RAPL2	Q9NP60	686 aa		12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	FAM198A	Q9UFP1	575 aa		12.64	□□□□□ -0.39

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