RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MAP3K11Q16584 847 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 LDLRAD1Q5T700 205 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 FTSJ3Q8IY81 847 aaKnown RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 TMEM57Q8N5G2 664 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 CLUAP1Q96AJ1 413 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 ZDHHC15Q96MV8 337 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 CSRNP1Q96S65 589 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 TDRD3Q9H7E2 651 aaKnown RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 GNL3LQ9NVN8 582 aaKnown RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 ZNF70Q9UC06 446 aaPredicted RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 TSKSQ9UJT2 592 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 ANGEL1Q9UNK9 670 aaKnown RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 PA2G4Q9UQ80 394 aaKnown RBP5.94□□□□□ -1.46
CLK3-219ENST00000567805 AOX1Q06278 1338 aa5.94□□□□□ -1.46
CLK3-219ENST00000567805 DOCK2Q92608 1830 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 TRPA1O75762 1119 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 IREB2P48200 963 aaKnown RBP5.93□□□□□ -1.46
CLK3-219ENST00000567805 TM4SF4P48230 202 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 SREBF2Q12772 1141 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 PRKG1Q13976 671 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 NBPF12Q5TAG4 269 aaPredicted RBP5.93□□□□□ -1.46
CLK3-219ENST00000567805 FKBP1CQ5VVH2 108 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 HHIPL2Q6UWX4 724 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 SPNS2Q8IVW8 549 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 ZGPATQ8N5A5 531 aaKnown RBP5.93□□□□□ -1.46
CLK3-219ENST00000567805 RNF186Q9NXI6 227 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 TMOD2Q9NZR1 351 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 DENND2AQ9ULE3 1009 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 TNNQ9UQP3 1299 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 AKAP2Q9Y2D5 859 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 PDS5AQ29RF7 1337 aaKnown RBP5.93□□□□□ -1.46
CLK3-219ENST00000567805 SALL1Q9NSC2 1324 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 MAST2Q6P0Q8 1798 aa5.93□□□□□ -1.46
CLK3-219ENST00000567805 RPAP1Q9BWH6 1393 aaPredicted RBP5.93□□□□□ -1.46
CLK3-219ENST00000567805 HTTP42858 3142 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 PNMA6EA0A0J9YXQ4 647 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 A0A1B0GUL7 405 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 TCP10L2B9ZVM9 353 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 USP2O75604 605 aaPredicted RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 LDHBP07195 334 aaKnown RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 ZBTB48P10074 688 aaPredicted RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 ADORA1P30542 326 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 PHKA1P46020 1223 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 INHBEP58166 350 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 TIMM10P62072 90 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 TFCP2Q12800 502 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 MVPQ14764 893 aaKnown RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 SPRYD7Q5W111 196 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 CCDC102BQ68D86 513 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 APOBEC3HQ6NTF7 200 aaKnown RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 FAM83AQ86UY5 434 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 ANKRD13AQ8IZ07 590 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 SLAIN1Q8ND83 568 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 HOOK2Q96ED9 719 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 SLC10A4Q96EP9 437 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 ABHD8Q96I13 439 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 TEPSINQ96N21 525 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 TMEM39BQ9GZU3 492 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 FZD1Q9UP38 647 aa5.92□□□□□ -1.46
CLK3-219ENST00000567805 MYO5AQ9Y4I1 1855 aaKnown RBP5.92□□□□□ -1.46
CLK3-219ENST00000567805 FOCADQ5VW36 1801 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 MANSC4A6NHS7 340 aaPredicted RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 ZBTB7BO15156 539 aaPredicted RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 TNRC18O15417 2968 aaPredicted RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 ALDH1A1P00352 501 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 RLBP1P12271 317 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 PRKCSHP14314 528 aaPredicted RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 PRDX5P30044 214 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 CACNB3P54284 484 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 MKRN3Q13064 507 aaKnown RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 G3BP1Q13283 466 aaKnown RBP eCLIP5.91□□□□□ -1.46
CLK3-219ENST00000567805 RASGRF1Q13972 1273 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 NOM1Q5C9Z4 860 aaKnown RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 SPTY2D1Q68D10 685 aaPredicted RBP5.91□□□□□ -1.46
CLK3-219ENST00000567805 ITPRIPQ8IWB1 547 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 SSH3Q8TE77 659 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 XAGE2Q96GT9 111 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 WNK4Q96J92 1243 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 CLMNQ96JQ2 1002 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 CFHR5Q9BXR6 569 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 DAGLAQ9Y4D2 1042 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 CDK5RAP2Q96SN8 1893 aa5.91□□□□□ -1.46
CLK3-219ENST00000567805 BRCA2P51587 3418 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 MS4A1P11836 297 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 ATP8B2P98198 1209 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 DGKZQ13574 1117 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 DIXDC1Q155Q3 683 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 GORABQ5T7V8 394 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 DCAF15Q66K64 600 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 CDC42EP5Q6NZY7 148 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 DZIP1Q86YF9 867 aaKnown RBP5.9□□□□□ -1.46
CLK3-219ENST00000567805 IFNL1Q8IU54 200 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 SLF2Q8IX21 1173 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.9□□□□□ -1.46
CLK3-219ENST00000567805 FAM151AQ8WW52 585 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 OPTNQ96CV9 577 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 NEUROD6Q96NK8 337 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 MCOLN1Q9GZU1 580 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 ELP3Q9H9T3 547 aa5.9□□□□□ -1.46
CLK3-219ENST00000567805 GPR108Q9NPR9 543 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms