RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 MYO5AQ9Y4I1 1855 aaKnown RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 SSC5DA1L4H1 1573 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 SURF6O75683 361 aaKnown RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 ZBTB48P10074 688 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 PRDX5P30044 214 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 MAP3K9P80192 1104 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 OS9Q13438 667 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 RASGRF1Q13972 1273 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 SLF2Q8IX21 1173 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 PANK1Q8TE04 598 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 HOOK2Q96ED9 719 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 C1orf115Q9H7X2 142 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 GPR108Q9NPR9 543 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 USP40Q9NVE5 1235 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 ABCF2Q9UG63 623 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 OTOFQ9HC10 1997 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 LAMB1P07942 1786 aa8.53□□□□□ -1.04
SF3B3-209ENST00000567635 PDS5AQ29RF7 1337 aaKnown RBP8.53□□□□□ -1.04
SF3B3-209ENST00000567635 TBC1D8O95759 1140 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 UQCRFS1P1P0C7P4 283 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 CDC42EP5Q6NZY7 148 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 CDAN1Q8IWY9 1227 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 SPATA5Q8NB90 893 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 FAM151AQ8WW52 585 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 FAM163AQ96GL9 167 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-209ENST00000567635 ABHD8Q96I13 439 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 WNK4Q96J92 1243 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
SF3B3-209ENST00000567635 NOP58Q9Y2X3 529 aaKnown RBP8.52□□□□□ -1.05
SF3B3-209ENST00000567635 ABCB7O75027 752 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 ALDH1A1P00352 501 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 ARID4AP29374 1257 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-209ENST00000567635 TCP10Q12799 353 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 DGKZQ13574 1117 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 TNNI3KQ59H18 835 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 DCAF15Q66K64 600 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 OTUD7BQ6GQQ9 843 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-209ENST00000567635 ERICH6Q7L0X2 663 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 DZIP1Q86YF9 867 aaKnown RBP8.51□□□□□ -1.05
SF3B3-209ENST00000567635 IFNL1Q8IU54 200 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 MCOLN1Q9GZU1 580 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 ELP3Q9H9T3 547 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 HMG20BQ9P0W2 317 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 CSADQ9Y600 493 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 FPGT-TNNI3KV9GXZ4 949 aa8.51□□□□□ -1.05
SF3B3-209ENST00000567635 LDHCP07864 332 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 GJA5P36382 358 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 GSTO1P78417 241 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 MECOMQ03112 1051 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 VGLL4Q14135 290 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
SF3B3-209ENST00000567635 CCDC158Q5M9N0 1113 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 CEP85Q6P2H3 762 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 TBC1D9Q6ZT07 1266 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 MIGA2Q7L4E1 593 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3B3-209ENST00000567635 OPTNQ96CV9 577 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 ZNF341Q9BYN7 854 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
SF3B3-209ENST00000567635 GAKO14976 1311 aa8.5□□□□□ -1.05
SF3B3-209ENST00000567635 GPR75-ASB3A0A0A6YYF3 556 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-209ENST00000567635 CCDC85CA6NKD9 419 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 GPR25O00155 361 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ENTPD3O75355 529 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 MCAMP43121 646 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 GTF2A2P52657 109 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 NFIAQ12857 509 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 TTC39AQ5SRH9 613 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ERO1BQ86YB8 467 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ERC1Q8IUD2 1116 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ZFPM1Q8IX07 1006 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 RPAP2Q8IXW5 612 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ZNF296Q8WUU4 475 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ZKSCAN4Q969J2 545 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-209ENST00000567635 MS4A4AQ96JQ5 239 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 ZNF512BQ96KM6 892 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-209ENST00000567635 WRNIP1Q96S55 665 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 DBNDD2Q9BQY9 259 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 IDI2Q9BXS1 227 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 RAI14Q9P0K7 980 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 LRP2BPQ9P2M1 347 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 DDX19BQ9UMR2 479 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 COG6Q9Y2V7 657 aa8.49□□□□□ -1.05
SF3B3-209ENST00000567635 RPAP1Q9BWH6 1393 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 DOCK2Q92608 1830 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 FKTNO75072 461 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 MAP4K4O95819 1239 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-209ENST00000567635 BTDP43251 543 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 RGS3P49796 1198 aa8.48□□□□□ -1.05
SF3B3-209ENST00000567635 PKN2Q16513 984 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms