RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 TAF1CQ15572 869 aaPredicted RBP19.01■□□□□ 0.63
CDR2-206ENST00000567406 ZFPM1Q8IX07 1006 aa19.01■□□□□ 0.63
CDR2-206ENST00000567406 ERO1AQ96HE7 468 aa19.01■□□□□ 0.63
CDR2-206ENST00000567406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.01■□□□□ 0.63
CDR2-206ENST00000567406 MKI67P46013 3256 aaKnown RBP19■□□□□ 0.63
CDR2-206ENST00000567406 SPDYE5A6NIY4 337 aa19■□□□□ 0.63
CDR2-206ENST00000567406 IRF6O14896 467 aa19■□□□□ 0.63
CDR2-206ENST00000567406 BCAR3O75815 825 aa19■□□□□ 0.63
CDR2-206ENST00000567406 LDHBP07195 334 aaKnown RBP19■□□□□ 0.63
CDR2-206ENST00000567406 FKBP1CQ5VVH2 108 aa19■□□□□ 0.63
CDR2-206ENST00000567406 CCDC102BQ68D86 513 aa19■□□□□ 0.63
CDR2-206ENST00000567406 EFCC1Q9HA90 598 aa19■□□□□ 0.63
CDR2-206ENST00000567406 COPRSQ9NQ92 184 aa19■□□□□ 0.63
CDR2-206ENST00000567406 USP40Q9NVE5 1235 aa19■□□□□ 0.63
CDR2-206ENST00000567406 GNL3LQ9NVN8 582 aaKnown RBP19■□□□□ 0.63
CDR2-206ENST00000567406 FBXO3Q9UK99 471 aa19■□□□□ 0.63
CDR2-206ENST00000567406 PTPN22Q9Y2R2 807 aa19■□□□□ 0.63
CDR2-206ENST00000567406 BRCA2P51587 3418 aa19■□□□□ 0.63
CDR2-206ENST00000567406 AK9Q5TCS8 1911 aa19■□□□□ 0.63
CDR2-206ENST00000567406 ECM2O94769 699 aaPredicted RBP18.99■□□□□ 0.63
CDR2-206ENST00000567406 TFCP2Q12800 502 aa18.99■□□□□ 0.63
CDR2-206ENST00000567406 INTS3Q68E01 1043 aaKnown RBP18.99■□□□□ 0.63
CDR2-206ENST00000567406 FAM151AQ8WW52 585 aa18.99■□□□□ 0.63
CDR2-206ENST00000567406 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
CDR2-206ENST00000567406 FAM198AQ9UFP1 575 aa18.99■□□□□ 0.63
CDR2-206ENST00000567406 POTEFA5A3E0 1075 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 BTBD19C9JJ37 291 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 SRGAP3O43295 1099 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 DCAF15Q66K64 600 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 ERO1BQ86YB8 467 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 CLUAP1Q96AJ1 413 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 ZNF341Q9BYN7 854 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 ZFYVE28Q9HCC9 887 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 DENND2AQ9ULE3 1009 aa18.98■□□□□ 0.63
CDR2-206ENST00000567406 SLURP2P0DP57 97 aa18.97■□□□□ 0.63
CDR2-206ENST00000567406 RASGRF1Q13972 1273 aa18.97■□□□□ 0.63
CDR2-206ENST00000567406 CETPP11597 493 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 TRIM27P14373 513 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.96■□□□□ 0.63
CDR2-206ENST00000567406 ARHGAP45Q92619 1136 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 HOOK2Q96ED9 719 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 XAGE2Q96GT9 111 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 ARHGAP39Q9C0H5 1083 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 ABCF2Q9UG63 623 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
CDR2-206ENST00000567406 A0A1B0GUL7 405 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 SLC34A2O95436 690 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 GNAI3P08754 354 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 PPIL2Q13356 520 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 NEUROD6Q96NK8 337 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 SALL1Q9NSC2 1324 aa18.95■□□□□ 0.62
CDR2-206ENST00000567406 RPAP1Q9BWH6 1393 aaPredicted RBP18.94■□□□□ 0.62
CDR2-206ENST00000567406 MYH2Q9UKX2 1941 aa18.94■□□□□ 0.62
CDR2-206ENST00000567406 SEMA3EO15041 775 aa18.94■□□□□ 0.62
CDR2-206ENST00000567406 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
CDR2-206ENST00000567406 ZSWIM8A7E2V4 1837 aa18.94■□□□□ 0.62
CDR2-206ENST00000567406 KIAA0100Q14667 2235 aaKnown RBP18.93■□□□□ 0.62
CDR2-206ENST00000567406 PNMA6EA0A0J9YXQ4 647 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 MYCP01106 439 aaPredicted RBP18.93■□□□□ 0.62
CDR2-206ENST00000567406 RGS3P49796 1198 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 PPATQ06203 517 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 PI16Q6UXB8 463 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 SH3BP5LQ7L8J4 393 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 DZIP1Q86YF9 867 aaKnown RBP18.93■□□□□ 0.62
CDR2-206ENST00000567406 PTCH2Q9Y6C5 1203 aa18.93■□□□□ 0.62
CDR2-206ENST00000567406 TLR2O60603 784 aa18.92■□□□□ 0.62
CDR2-206ENST00000567406 EN2P19622 333 aaPredicted RBP18.92■□□□□ 0.62
CDR2-206ENST00000567406 ATF7IPQ6VMQ6 1270 aa18.92■□□□□ 0.62
CDR2-206ENST00000567406 TBC1D9Q6ZT07 1266 aa18.92■□□□□ 0.62
CDR2-206ENST00000567406 DDX4Q9NQI0 724 aaKnown RBP18.92■□□□□ 0.62
CDR2-206ENST00000567406 CPA4Q9UI42 421 aa18.92■□□□□ 0.62
CDR2-206ENST00000567406 IPO8O15397 1037 aaKnown RBP18.91■□□□□ 0.62
CDR2-206ENST00000567406 GNAI2P04899 355 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 PICALMQ13492 652 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 MTX1Q13505 466 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 ZSCAN29Q8IWY8 852 aaPredicted RBP18.91■□□□□ 0.62
CDR2-206ENST00000567406 ZNF384Q8TF68 577 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 AKAP2Q9Y2D5 859 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 GAKO14976 1311 aa18.91■□□□□ 0.62
CDR2-206ENST00000567406 DDTLA6NHG4 134 aaPredicted RBP18.9■□□□□ 0.62
CDR2-206ENST00000567406 PDHXO00330 501 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 BTDP43251 543 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 MECOMQ03112 1051 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 MOGSQ13724 837 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
CDR2-206ENST00000567406 TMEM57Q8N5G2 664 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 ARMC5Q96C12 935 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 HMG20BQ9P0W2 317 aa18.9■□□□□ 0.62
CDR2-206ENST00000567406 PHF20L1A8MW92 1017 aa18.89■□□□□ 0.61
CDR2-206ENST00000567406 WDHD1O75717 1129 aaPredicted RBP18.89■□□□□ 0.61
CDR2-206ENST00000567406 CTGFP29279 349 aa18.89■□□□□ 0.61
CDR2-206ENST00000567406 LACTBP83111 547 aaPredicted RBP18.89■□□□□ 0.61
CDR2-206ENST00000567406 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
CDR2-206ENST00000567406 PRPF38BQ5VTL8 546 aaKnown RBP18.89■□□□□ 0.61
CDR2-206ENST00000567406 IDI2Q9BXS1 227 aa18.89■□□□□ 0.61
CDR2-206ENST00000567406 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
CDR2-206ENST00000567406 ATRNL1Q5VV63 1379 aa18.89■□□□□ 0.61
CDR2-206ENST00000567406 G3BP1Q13283 466 aaKnown RBP eCLIP18.88■□□□□ 0.61
CDR2-206ENST00000567406 NOL9Q5SY16 702 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms