RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CYP4F22Q6NT55 531 aa26.4■■□□□ 1.82
NME3-210ENST00000567271 PAXIP1Q6ZW49 1069 aaPredicted RBP26.4■■□□□ 1.82
NME3-210ENST00000567271 FAM83AQ86UY5 434 aa26.4■■□□□ 1.82
NME3-210ENST00000567271 TMEM39BQ9GZU3 492 aa26.4■■□□□ 1.82
NME3-210ENST00000567271 GPR75-ASB3A0A0A6YYF3 556 aa26.39■■□□□ 1.82
NME3-210ENST00000567271 MOB2Q70IA6 237 aa26.39■■□□□ 1.82
NME3-210ENST00000567271 CAPNS2Q96L46 248 aa26.39■■□□□ 1.82
NME3-210ENST00000567271 TEPSINQ96N21 525 aa26.39■■□□□ 1.82
NME3-210ENST00000567271 ANTXR1Q9H6X2 564 aa26.39■■□□□ 1.82
NME3-210ENST00000567271 WDR33Q9C0J8 1336 aaKnown RBP26.39■■□□□ 1.81
NME3-210ENST00000567271 PAPPA2Q9BXP8 1791 aa26.38■■□□□ 1.81
NME3-210ENST00000567271 ATP5JP18859 108 aa26.38■■□□□ 1.81
NME3-210ENST00000567271 ECE1P42892 770 aa26.38■■□□□ 1.81
NME3-210ENST00000567271 BTDP43251 543 aa26.38■■□□□ 1.81
NME3-210ENST00000567271 TTLL12Q14166 644 aaPredicted RBP26.38■■□□□ 1.81
NME3-210ENST00000567271 PCNTO95613 3336 aa26.37■■□□□ 1.81
NME3-210ENST00000567271 PRKG1Q13976 671 aa26.37■■□□□ 1.81
NME3-210ENST00000567271 RGMBQ6NW40 437 aa26.37■■□□□ 1.81
NME3-210ENST00000567271 CDAN1Q8IWY9 1227 aa26.37■■□□□ 1.81
NME3-210ENST00000567271 SSC5DA1L4H1 1573 aa26.37■■□□□ 1.81
NME3-210ENST00000567271 UBE2Q2LH0YL09 131 aa26.36■■□□□ 1.81
NME3-210ENST00000567271 IRX6P78412 446 aaPredicted RBP26.36■■□□□ 1.81
NME3-210ENST00000567271 NFIAQ12857 509 aa26.36■■□□□ 1.81
NME3-210ENST00000567271 NAA16Q6N069 864 aaPredicted RBP26.36■■□□□ 1.81
NME3-210ENST00000567271 GCC1Q96CN9 775 aa26.36■■□□□ 1.81
NME3-210ENST00000567271 GRM1Q13255 1194 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 ARMC9Q7Z3E5 817 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 FAM151AQ8WW52 585 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 IDI2Q9BXS1 227 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 BOLA2Q9H3K6 86 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 RWDD1Q9H446 243 aaPredicted RBP26.35■■□□□ 1.81
NME3-210ENST00000567271 FZD1Q9UP38 647 aa26.35■■□□□ 1.81
NME3-210ENST00000567271 PPP1R12BO60237 982 aaPredicted RBP26.34■■□□□ 1.81
NME3-210ENST00000567271 IDH1O75874 414 aaKnown RBP26.34■■□□□ 1.81
NME3-210ENST00000567271 RHBDL3P58872 404 aa26.34■■□□□ 1.81
NME3-210ENST00000567271 TTF1Q15361 905 aaPredicted RBP26.34■■□□□ 1.81
NME3-210ENST00000567271 MAP3K11Q16584 847 aa26.34■■□□□ 1.81
NME3-210ENST00000567271 DNAJC2Q99543 621 aaKnown RBP26.34■■□□□ 1.81
NME3-210ENST00000567271 ECHDC1Q9NTX5 307 aa26.34■■□□□ 1.81
NME3-210ENST00000567271 FAM198AQ9UFP1 575 aa26.34■■□□□ 1.81
NME3-210ENST00000567271 ANGEL1Q9UNK9 670 aaKnown RBP26.34■■□□□ 1.81
NME3-210ENST00000567271 MAP4K4O95819 1239 aaPredicted RBP26.33■■□□□ 1.81
NME3-210ENST00000567271 ZNF157P51786 506 aaPredicted RBP26.33■■□□□ 1.81
NME3-210ENST00000567271 HAUS7Q99871 368 aa26.33■■□□□ 1.81
NME3-210ENST00000567271 MYO5AQ9Y4I1 1855 aaKnown RBP26.33■■□□□ 1.81
NME3-210ENST00000567271 GOLIM4O00461 696 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 USP2O75604 605 aaPredicted RBP26.32■■□□□ 1.8
NME3-210ENST00000567271 WDHD1O75717 1129 aaPredicted RBP26.32■■□□□ 1.8
NME3-210ENST00000567271 TCP10Q12799 353 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 MAP3K12Q12852 859 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 LDLRAD1Q5T700 205 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 ADGRA1Q86SQ6 560 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 CCDC102AQ96A19 550 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 RFX7Q2KHR2 1363 aa26.32■■□□□ 1.8
NME3-210ENST00000567271 RPAP1Q9BWH6 1393 aaPredicted RBP26.32■■□□□ 1.8
NME3-210ENST00000567271 MAST2Q6P0Q8 1798 aa26.31■■□□□ 1.8
NME3-210ENST00000567271 FAM155AB1AL88 458 aaPredicted RBP26.31■■□□□ 1.8
NME3-210ENST00000567271 IGHDP01880 384 aa26.31■■□□□ 1.8
NME3-210ENST00000567271 RGS3P49796 1198 aa26.31■■□□□ 1.8
NME3-210ENST00000567271 PPP4CP60510 307 aa26.31■■□□□ 1.8
NME3-210ENST00000567271 ANKRD45Q5TZF3 282 aa26.31■■□□□ 1.8
NME3-210ENST00000567271 TMED8Q6PL24 325 aaPredicted RBP26.31■■□□□ 1.8
NME3-210ENST00000567271 AOC2O75106 756 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 ENTPD3O75355 529 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 BAG3O95817 575 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 CYP7A1P22680 504 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 MAP2K2P36507 400 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 ZFPM1Q8IX07 1006 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 MAGEB6Q8N7X4 407 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 EDC3Q96F86 508 aaKnown RBP26.3■■□□□ 1.8
NME3-210ENST00000567271 GPATCH3Q96I76 525 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 NOL10Q9BSC4 688 aaKnown RBP26.3■■□□□ 1.8
NME3-210ENST00000567271 PAG1Q9NWQ8 432 aa26.3■■□□□ 1.8
NME3-210ENST00000567271 SLC10A3P09131 477 aa26.29■■□□□ 1.8
NME3-210ENST00000567271 SMC5Q8IY18 1101 aa26.29■■□□□ 1.8
NME3-210ENST00000567271 HOOK2Q96ED9 719 aa26.29■■□□□ 1.8
NME3-210ENST00000567271 DDX4Q9NQI0 724 aaKnown RBP26.29■■□□□ 1.8
NME3-210ENST00000567271 AATFQ9NY61 560 aaKnown RBP eCLIP26.29■■□□□ 1.8
NME3-210ENST00000567271 ZBTB47Q9UFB7 747 aaPredicted RBP26.29■■□□□ 1.8
NME3-210ENST00000567271 DOCK2Q92608 1830 aa26.29■■□□□ 1.8
NME3-210ENST00000567271 UNCXA6NJT0 531 aa26.28■■□□□ 1.8
NME3-210ENST00000567271 NPM3O75607 178 aaKnown RBP26.28■■□□□ 1.8
NME3-210ENST00000567271 IREB2P48200 963 aaKnown RBP26.28■■□□□ 1.8
NME3-210ENST00000567271 NOGQ13253 232 aa26.28■■□□□ 1.8
NME3-210ENST00000567271 RASAL3Q86YV0 1011 aa26.28■■□□□ 1.8
NME3-210ENST00000567271 OTUD7AQ8TE49 926 aaPredicted RBP26.28■■□□□ 1.8
NME3-210ENST00000567271 SH3RF3Q8TEJ3 882 aaPredicted RBP26.28■■□□□ 1.8
NME3-210ENST00000567271 PICALMQ13492 652 aa26.27■■□□□ 1.8
NME3-210ENST00000567271 TSHZ3Q63HK5 1081 aa26.27■■□□□ 1.8
NME3-210ENST00000567271 THSD7BQ9C0I4 1608 aa26.26■■□□□ 1.79
NME3-210ENST00000567271 TTC41PQ6P2S7 1318 aa26.26■■□□□ 1.79
NME3-210ENST00000567271 PLCG2P16885 1265 aa26.26■■□□□ 1.79
NME3-210ENST00000567271 SLC9C2Q5TAH2 1124 aa26.26■■□□□ 1.79
NME3-210ENST00000567271 TEX11Q8IYF3 940 aa26.26■■□□□ 1.79
NME3-210ENST00000567271 PDE6AP16499 860 aa26.25■■□□□ 1.79
NME3-210ENST00000567271 SH3BP5LQ7L8J4 393 aa26.25■■□□□ 1.79
NME3-210ENST00000567271 ZIC5Q96T25 663 aa26.25■■□□□ 1.79
NME3-210ENST00000567271 SALL3Q9BXA9 1300 aa26.24■■□□□ 1.79
NME3-210ENST00000567271 DYNLL1P63167 89 aaKnown RBP26.24■■□□□ 1.79
NME3-210ENST00000567271 MAP2K1Q02750 393 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms