RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 MRPS27Q92552 414 aaKnown RBP7.51□□□□□ -1.21
GINS3-206ENST00000567143 ANO10Q9NW15 660 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 DNAI1Q9UI46 699 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 MAST3O60307 1309 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 COBLO75128 1261 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 SERPINC1P01008 464 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 SIK1P57059 783 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 CFAP100Q494V2 611 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 RALYLQ86SE5 291 aaKnown RBP7.51□□□□□ -1.21
GINS3-206ENST00000567143 ANKRD7Q92527 254 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 KCNB2Q92953 911 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 CTNNA3Q9UI47 895 aa7.51□□□□□ -1.21
GINS3-206ENST00000567143 BRCA1P38398 1863 aaKnown RBP7.51□□□□□ -1.21
GINS3-206ENST00000567143 KIF28PB7ZC32 967 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 PRC1O43663 620 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 SLC3A2P08195 630 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 SNRPA1P09661 255 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 FDPSP14324 419 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 SFPQP23246 707 aaKnown RBP eCLIP7.5□□□□□ -1.21
GINS3-206ENST00000567143 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 TTC39AQ5SRH9 613 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 NBPF14Q5TI25 921 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 ZNF396Q96N95 335 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 HAUS7Q99871 368 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 ZKSCAN3Q9BRR0 538 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 ZSCAN16Q9H4T2 348 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 SENP2Q9HC62 589 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 PFKFB2O60825 505 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 URI1O94763 535 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 RFX5P48382 616 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 PNOCQ13519 176 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 NFXL1Q6ZNB6 911 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 LRP10Q7Z4F1 713 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 KIF18AQ8NI77 898 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 CHMP4AQ9BY43 222 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 PUS7LQ9H0K6 701 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 COPRSQ9NQ92 184 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 PNPLA7Q6ZV29 1317 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 hCG_1642624A0A1W2PR95 340 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 SPTLC2O15270 562 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 FOXN1O15353 648 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 CTIFO43310 598 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 FGAP02671 866 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 CYP19A1P11511 503 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 ZAP70P43403 619 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 CCZ1BP86790 482 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 CCZ1P86791 482 aaPredicted RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 TRMT44Q8IYL2 757 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 DPF2Q92785 391 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 UTP14AQ9BVJ6 771 aaKnown RBP7.5□□□□□ -1.21
GINS3-206ENST00000567143 CEP126Q9P2H0 1117 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 RCOR1Q9UKL0 485 aa7.5□□□□□ -1.21
GINS3-206ENST00000567143 TMEM232C9JQI7 657 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 RPS6KA4O75676 772 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 ZNF202O95125 648 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 GRAMD1CQ8IYS0 662 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 CPLX3Q8WVH0 158 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 IQSEC3Q9UPP2 1182 aaPredicted RBP7.49□□□□□ -1.21
GINS3-206ENST00000567143 CARMIL3Q8ND23 1372 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 SEC31AO94979 1220 aaKnown RBP7.49□□□□□ -1.21
GINS3-206ENST00000567143 ITPK1Q13572 414 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 CCDC57Q2TAC2 916 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 ARHGAP29Q52LW3 1261 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 KLHL10Q6JEL2 608 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 ARMCX5Q6P1M9 558 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
GINS3-206ENST00000567143 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 LINC00116Q8NCU8 138 aa7.49□□□□□ -1.21
GINS3-206ENST00000567143 B4E1Z4 1266 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 PFKFB1P16118 471 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 E4F1Q66K89 784 aaPredicted RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 ATG9AQ7Z3C6 839 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 DEFB132Q7Z7B7 95 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 NBPF11Q86T75 865 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 CCDC34Q96HJ3 373 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 NAT10Q9H0A0 1025 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 KIAA1468Q9P260 1216 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 ASAP1Q9ULH1 1129 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 PAXBP1Q9Y5B6 917 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 PXDNLA1KZ92 1463 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 RNF113AO15541 343 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 WDHD1O75717 1129 aaPredicted RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 IMMTQ16891 758 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 USPL1Q5W0Q7 1092 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 FMR1NBQ8N0W7 255 aaPredicted RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 LINC00301Q8NCQ3 95 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 DESI2Q9BSY9 194 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 OGFRQ9NZT2 677 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 ARFGEF1Q9Y6D6 1849 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 CDK11BP21127 795 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 CASP1P29466 404 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 PTGER2P43116 358 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 GYS2P54840 703 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 KARSQ15046 597 aaKnown RBP7.48□□□□□ -1.21
GINS3-206ENST00000567143 SKIDA1Q1XH10 827 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 SLC4A8Q2Y0W8 1093 aa7.48□□□□□ -1.21
GINS3-206ENST00000567143 MYSM1Q5VVJ2 828 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms