RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 CD209Q9NNX6 404 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 THEGQ9P2T0 379 aa12.55□□□□□ -0.4
CAPN3-216ENST00000567071 CDH23Q9H251 3354 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-216ENST00000567071 DCAF15Q66K64 600 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 ASB2Q96Q27 587 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 TTYH1Q9H313 450 aaPredicted RBP12.54□□□□□ -0.4
CAPN3-216ENST00000567071 TDRD3Q9H7E2 651 aaKnown RBP12.54□□□□□ -0.4
CAPN3-216ENST00000567071 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 OGDHLQ9ULD0 1010 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 KCNH4Q9UQ05 1017 aa12.54□□□□□ -0.4
CAPN3-216ENST00000567071 IGHMBP2P38935 993 aaKnown RBP12.53□□□□□ -0.4
CAPN3-216ENST00000567071 MRPS5P82675 430 aaKnown RBP12.53□□□□□ -0.4
CAPN3-216ENST00000567071 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
CAPN3-216ENST00000567071 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
CAPN3-216ENST00000567071 PFASO15067 1338 aa12.53□□□□□ -0.4
CAPN3-216ENST00000567071 CYP2C8P10632 490 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 CTSWP56202 376 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 CCDC191Q8NCU4 936 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 SMCR8Q8TEV9 937 aaPredicted RBP12.52□□□□□ -0.41
CAPN3-216ENST00000567071 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 SERPINA10Q9UK55 444 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 AOX1Q06278 1338 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 DOCK3Q8IZD9 2030 aa12.52□□□□□ -0.41
CAPN3-216ENST00000567071 MYH3P11055 1940 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 KLRK1P26718 216 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 GOLGA2Q08379 1002 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 NFE2L2Q16236 605 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 LRRC26Q2I0M4 334 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 P2RX7Q99572 595 aaKnown RBP12.51□□□□□ -0.41
CAPN3-216ENST00000567071 HYPKQ9NX55 129 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-216ENST00000567071 TMOD2Q9NZR1 351 aa12.51□□□□□ -0.41
CAPN3-216ENST00000567071 DBF4Q9UBU7 674 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-216ENST00000567071 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-216ENST00000567071 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
CAPN3-216ENST00000567071 FASTKD5Q7L8L6 764 aaKnown RBP12.5□□□□□ -0.41
CAPN3-216ENST00000567071 DZIP1LQ8IYY4 767 aaKnown RBP12.5□□□□□ -0.41
CAPN3-216ENST00000567071 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-216ENST00000567071 MPHOSPH8Q99549 860 aa12.5□□□□□ -0.41
CAPN3-216ENST00000567071 ZNF341Q9BYN7 854 aa12.5□□□□□ -0.41
CAPN3-216ENST00000567071 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
CAPN3-216ENST00000567071 SHHQ15465 462 aa12.49□□□□□ -0.41
CAPN3-216ENST00000567071 TMEM31Q5JXX7 168 aa12.49□□□□□ -0.41
CAPN3-216ENST00000567071 PPM1EQ8WY54 764 aa12.49□□□□□ -0.41
CAPN3-216ENST00000567071 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
CAPN3-216ENST00000567071 TTF2Q9UNY4 1162 aaKnown RBP12.49□□□□□ -0.41
CAPN3-216ENST00000567071 CXCL11O14625 94 aa12.48□□□□□ -0.41
CAPN3-216ENST00000567071 COL6A1P12109 1028 aa12.48□□□□□ -0.41
CAPN3-216ENST00000567071 DDX10Q13206 875 aaKnown RBP12.48□□□□□ -0.41
CAPN3-216ENST00000567071 MYD88Q99836 296 aa12.48□□□□□ -0.41
CAPN3-216ENST00000567071 GREM2Q9H772 168 aa12.48□□□□□ -0.41
CAPN3-216ENST00000567071 MYO9BQ13459 2157 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 DNAH12Q6ZR08 3092 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 IL1R1P14778 569 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 POLA2Q14181 598 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 TTLL11Q8NHH1 800 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 JARID2Q92833 1246 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-216ENST00000567071 TSPYL2Q9H2G4 693 aaPredicted RBP12.47□□□□□ -0.41
CAPN3-216ENST00000567071 PNNQ9H307 717 aaKnown RBP12.47□□□□□ -0.41
CAPN3-216ENST00000567071 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
CAPN3-216ENST00000567071 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 INPP5BP32019 993 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 MOGSQ13724 837 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 MFSD14BQ5SR56 506 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 GPAT2Q6NUI2 795 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 GADL1Q6ZQY3 521 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 SLC45A1Q9Y2W3 748 aa12.46□□□□□ -0.41
CAPN3-216ENST00000567071 AK9Q5TCS8 1911 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 CRKP46108 304 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 MRE11P49959 708 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 PDE3AQ14432 1141 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 GRIN2CQ14957 1233 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 C9orf50Q5SZB4 431 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 C15orf52Q6ZUT6 534 aaKnown RBP12.45□□□□□ -0.42
CAPN3-216ENST00000567071 FAM83AQ86UY5 434 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 LTBP2Q14767 1821 aa12.45□□□□□ -0.42
CAPN3-216ENST00000567071 TCF20Q9UGU0 1960 aaKnown RBP12.44□□□□□ -0.42
CAPN3-216ENST00000567071 HOXB7P09629 217 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 PRKAR2AP13861 404 aaKnown RBP12.44□□□□□ -0.42
CAPN3-216ENST00000567071 CHRNDQ07001 517 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 TRIM32Q13049 653 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 FAM110CQ1W6H9 321 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 AKNAD1Q5T1N1 836 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 ANKRD13CQ8N6S4 541 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 SENP6Q9GZR1 1112 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-216ENST00000567071 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
CAPN3-216ENST00000567071 RPAP1Q9BWH6 1393 aaPredicted RBP12.43□□□□□ -0.42
CAPN3-216ENST00000567071 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
CAPN3-216ENST00000567071 AAK1Q2M2I8 961 aa12.43□□□□□ -0.42
CAPN3-216ENST00000567071 FKBP1CQ5VVH2 108 aa12.43□□□□□ -0.42
CAPN3-216ENST00000567071 MIGA2Q7L4E1 593 aa12.43□□□□□ -0.42
CAPN3-216ENST00000567071 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
CAPN3-216ENST00000567071 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
CAPN3-216ENST00000567071 A0A0G2JLL6 359 aaPredicted RBP12.42□□□□□ -0.42
CAPN3-216ENST00000567071 ITGA6P23229 1130 aa12.42□□□□□ -0.42
CAPN3-216ENST00000567071 DNAJB2P25686 324 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms