RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 BIN1O00499 593 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 ATP6V1AP38606 617 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 ARHGAP25P42331 645 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 SH3BGRP55822 239 aaPredicted RBP4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 GUCY1B3Q02153 619 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 TMTC1Q8IUR5 882 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 NYXQ9GZU5 481 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 NUCKS1Q9H1E3 243 aaKnown RBP4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 MIS18AQ9NYP9 233 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 MTRF1LQ9UGC7 380 aaKnown RBP4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 SWAP70Q9UH65 585 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 TRMT112Q9UI30 125 aaKnown RBP4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 CUTAO60888 179 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 KIF4AO95239 1232 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 ACTN2P35609 894 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 BRD3Q15059 726 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 C8orf58Q8NAV2 365 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 PAG1Q9NWQ8 432 aa4.92□□□□□ -1.62
LPCAT2-208ENST00000566915 SPDYE4A6NLX3 237 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 GIGYF1O75420 1035 aaPredicted RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RLBP1P12271 317 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PTGS1P23219 599 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RPS6KB1P23443 525 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 GNA11P29992 359 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NOP2P46087 812 aaKnown RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PLCD1P51178 756 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 ZNF75DP51815 510 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 ATP2B2Q01814 1243 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CCDC96Q2M329 555 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 MICU3Q86XE3 530 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 SLC16A10Q8TF71 515 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CCDC113Q9H0I3 377 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RBSNQ9H1K0 784 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 LMBRD1Q9NUN5 540 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CLTCL1P53675 1640 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 KIF1AQ12756 1690 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PTPDC1A2A3K4 754 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 SGSM2O43147 1006 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PRC1O43663 620 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 TBCAO75347 108 aaKnown RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PPP2R5EQ16537 467 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 ATP2B3Q16720 1220 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CCDC152Q4G0S7 254 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 SKAP1Q86WV1 359 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 IFT74Q96LB3 600 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 GOPCQ9HD26 462 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 C6orf50Q9HD87 102 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 MST1RQ04912 1400 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NEURL4Q96JN8 1562 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 AATKQ6ZMQ8 1374 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 A0A1B0GUA9 196 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 TSPY2A6NKD2 308 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PLCG2P16885 1265 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NMIQ13287 307 aaPredicted RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 MCM6Q14566 821 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 MSL1Q68DK7 614 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RUFY4Q6ZNE9 571 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 UBE3BQ7Z3V4 1068 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CCDC26Q8TAB7 109 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RPGRQ92834 1020 aaKnown RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 LRRC45Q96CN5 670 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 ACSBG1Q96GR2 724 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NAPGQ99747 312 aaPredicted RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 TECPR2O15040 1411 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 TRIM37O94972 964 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 KRT2P35908 639 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 PPFIA1Q13136 1202 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CYP26C1Q6V0L0 522 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 GPR161Q8N6U8 529 aaKnown RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 DDX17Q92841 729 aaKnown RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 MRFAP1L1Q96HT8 127 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 IFNKQ9P0W0 207 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 RSPH14Q9UHP6 348 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 ZHX1Q9UKY1 873 aaPredicted RBP4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 IKBKGQ9Y6K9 419 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 E9PCH4 1651 aa4.91□□□□□ -1.62
LPCAT2-208ENST00000566915 CRB1P82279 1406 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 MROH1Q8NDA8 1641 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 CHL1O00533 1208 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 HLA-DOAP06340 250 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 IDEP14735 1019 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 RPL13P26373 211 aaKnown RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 EVCP57679 992 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 MAPK8IP2Q13387 824 aaPredicted RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 DNAJC21Q5F1R6 531 aaKnown RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 IFIT1BQ5T764 474 aaKnown RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 NLGN1Q8N2Q7 840 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 TRIML1Q8N9V2 468 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 RSRC1Q96IZ7 334 aaKnown RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 IQSEC3Q9UPP2 1182 aaPredicted RBP4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 NRXN1Q9ULB1 1477 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 KRT13P13646 458 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 HOXC9P31274 260 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 NLRP12P59046 1061 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 PPP2R3AQ06190 1150 aa4.9□□□□□ -1.62
LPCAT2-208ENST00000566915 EIF4A2Q14240 407 aaKnown RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms