RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 COPS6Q7L5N1 327 aa12.68□□□□□ -0.38
TCF4-232ENST00000566286 C8orf37Q96NL8 207 aa12.68□□□□□ -0.38
TCF4-232ENST00000566286 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
TCF4-232ENST00000566286 PHLPP2Q6ZVD8 1323 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 A0A1B0GVL5 298 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 SLC3A2P08195 630 aaKnown RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 MYL6BP14649 208 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 EVCP57679 992 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 MDM2Q00987 491 aaPredicted RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 MYSM1Q5VVJ2 828 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 SYT10Q6XYQ8 523 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 BRAPQ7Z569 592 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 SRRTQ9BXP5 876 aaKnown RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 NCOA5Q9HCD5 579 aaKnown RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 ARGLU1Q9NWB6 273 aaPredicted RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 PAG1Q9NWQ8 432 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 NAP1L2Q9ULW6 460 aaPredicted RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.67□□□□□ -0.38
TCF4-232ENST00000566286 NDUFB9Q9Y6M9 179 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 CPDO75976 1380 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 IKBKBO14920 756 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 DHX16O60231 1041 aaKnown RBP12.67□□□□□ -0.38
TCF4-232ENST00000566286 GUCY1B3Q02153 619 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 ZMYM1Q5SVZ6 1142 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 GPR108Q9NPR9 543 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 ZNF446Q9NWS9 450 aa12.67□□□□□ -0.38
TCF4-232ENST00000566286 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
TCF4-232ENST00000566286 SPTLC2O15270 562 aa12.66□□□□□ -0.38
TCF4-232ENST00000566286 CHGBP05060 677 aa12.66□□□□□ -0.38
TCF4-232ENST00000566286 HSPD1P10809 573 aaKnown RBP12.66□□□□□ -0.38
TCF4-232ENST00000566286 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
TCF4-232ENST00000566286 ERCC6LQ2NKX8 1250 aa12.66□□□□□ -0.38
TCF4-232ENST00000566286 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
TCF4-232ENST00000566286 ERCC4Q92889 916 aaPredicted RBP12.66□□□□□ -0.38
TCF4-232ENST00000566286 MEGF6O75095 1541 aa12.66□□□□□ -0.38
TCF4-232ENST00000566286 GOLIM4O00461 696 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 CBFA2T2O43439 604 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 OSBPP22059 807 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 UBE3BQ7Z3V4 1068 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 HOMER1Q86YM7 354 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 C8orf76Q96K31 380 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 CALCOCO1Q9P1Z2 691 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 NEDD4P46934 1319 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 ARFGEF2Q9Y6D5 1785 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 TPM1P09493 284 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
TCF4-232ENST00000566286 CHRNA2Q15822 529 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
TCF4-232ENST00000566286 SYNE3Q6ZMZ3 975 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 NOL10Q9BSC4 688 aaKnown RBP12.65□□□□□ -0.38
TCF4-232ENST00000566286 SLC52A2Q9HAB3 445 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 SLAIN2Q9P270 581 aa12.65□□□□□ -0.38
TCF4-232ENST00000566286 SOS2Q07890 1332 aaPredicted RBP12.64□□□□□ -0.39
TCF4-232ENST00000566286 MYO1BO43795 1136 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 ZNF202O95125 648 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 CLCN6P51797 869 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 NCAPHQ15003 741 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
TCF4-232ENST00000566286 ARHGAP29Q52LW3 1261 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 FCHSD1Q86WN1 690 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 FBXO18Q8NFZ0 1043 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 UBXN4Q92575 508 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 TIGD1Q96MW7 591 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 GPCPD1Q9NPB8 672 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 FHOD1Q9Y613 1164 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 CLIC4Q9Y696 253 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 ABCA3Q99758 1704 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 A0A087WZG4 1122 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 NPHP1O15259 732 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 CMA1P23946 247 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 FANCCQ00597 558 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 TMED8Q6PL24 325 aaPredicted RBP12.64□□□□□ -0.39
TCF4-232ENST00000566286 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
TCF4-232ENST00000566286 MAST3O60307 1309 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 RNF113AO15541 343 aaKnown RBP12.63□□□□□ -0.39
TCF4-232ENST00000566286 ATP8B1O43520 1251 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 PRR29P0C7W0 189 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
TCF4-232ENST00000566286 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 TMCO3Q6UWJ1 677 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 MNS1Q8NEH6 495 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 PLEKHG2Q9H7P9 1386 aa12.63□□□□□ -0.39
TCF4-232ENST00000566286 KDM6AO15550 1401 aaPredicted RBP12.63□□□□□ -0.39
TCF4-232ENST00000566286 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 SNRPA1P09661 255 aaKnown RBP12.62□□□□□ -0.39
TCF4-232ENST00000566286 PNMA6AP0CW24 399 aaPredicted RBP12.62□□□□□ -0.39
TCF4-232ENST00000566286 SLC39A6Q13433 755 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 ANO1Q5XXA6 986 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 LRP10Q7Z4F1 713 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 FMNL2Q96PY5 1086 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 DNAI1Q9UI46 699 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 BIN1O00499 593 aa12.62□□□□□ -0.39
TCF4-232ENST00000566286 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms