RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CWF19L2Q2TBE0 894 aaKnown RBP21.39■■□□□ 1.01
CLK3-217ENST00000566126 UBE3BQ7Z3V4 1068 aa21.39■■□□□ 1.01
CLK3-217ENST00000566126 PLA2G12BQ9BX93 195 aa21.39■■□□□ 1.01
CLK3-217ENST00000566126 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.39■■□□□ 1.01
CLK3-217ENST00000566126 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
CLK3-217ENST00000566126 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
CLK3-217ENST00000566126 CSF1RP07333 972 aa21.38■■□□□ 1.01
CLK3-217ENST00000566126 GPAT2Q6NUI2 795 aa21.38■■□□□ 1.01
CLK3-217ENST00000566126 NBPF3Q9H094 633 aa21.38■■□□□ 1.01
CLK3-217ENST00000566126 CDH23Q9H251 3354 aa21.37■■□□□ 1.01
CLK3-217ENST00000566126 PI4KAP2A4QPH2 592 aa21.36■■□□□ 1.01
CLK3-217ENST00000566126 NEURL1BA8MQ27 555 aa21.36■■□□□ 1.01
CLK3-217ENST00000566126 ELL2O00472 640 aaPredicted RBP21.36■■□□□ 1.01
CLK3-217ENST00000566126 GRIK5Q16478 980 aa21.36■■□□□ 1.01
CLK3-217ENST00000566126 KSR2Q6VAB6 950 aa21.36■■□□□ 1.01
CLK3-217ENST00000566126 PI4KAP1Q8N8J0 262 aa21.36■■□□□ 1.01
CLK3-217ENST00000566126 TDRD7Q8NHU6 1098 aaKnown RBP21.35■■□□□ 1.01
CLK3-217ENST00000566126 C11orf49Q9H6J7 331 aa21.35■■□□□ 1.01
CLK3-217ENST00000566126 TNPO2O14787 897 aaKnown RBP21.34■■□□□ 1.01
CLK3-217ENST00000566126 CASP7P55210 303 aa21.34■■□□□ 1.01
CLK3-217ENST00000566126 MIGA2Q7L4E1 593 aa21.34■■□□□ 1.01
CLK3-217ENST00000566126 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
CLK3-217ENST00000566126 MAFAQ8NHW3 353 aaPredicted RBP21.34■■□□□ 1.01
CLK3-217ENST00000566126 CDX2Q99626 313 aaPredicted RBP21.34■■□□□ 1.01
CLK3-217ENST00000566126 ZNF341Q9BYN7 854 aa21.34■■□□□ 1.01
CLK3-217ENST00000566126 DCAF15Q66K64 600 aa21.33■■□□□ 1.01
CLK3-217ENST00000566126 FAM83AQ86UY5 434 aa21.33■■□□□ 1.01
CLK3-217ENST00000566126 PFASO15067 1338 aa21.32■■□□□ 1
CLK3-217ENST00000566126 NEXNQ0ZGT2 675 aa21.32■■□□□ 1
CLK3-217ENST00000566126 HOOK2Q96ED9 719 aa21.32■■□□□ 1
CLK3-217ENST00000566126 ZNF112Q9UJU3 913 aa21.32■■□□□ 1
CLK3-217ENST00000566126 TAOK2Q9UL54 1235 aa21.32■■□□□ 1
CLK3-217ENST00000566126 RPAP1Q9BWH6 1393 aaPredicted RBP21.32■■□□□ 1
CLK3-217ENST00000566126 DNAH12Q6ZR08 3092 aa21.32■■□□□ 1
CLK3-217ENST00000566126 ANKRD18BA2A2Z9 1011 aa21.31■■□□□ 1
CLK3-217ENST00000566126 ZNF853P0CG23 659 aa21.31■■□□□ 1
CLK3-217ENST00000566126 PLA2G5P39877 138 aa21.31■■□□□ 1
CLK3-217ENST00000566126 MDM2Q00987 491 aaPredicted RBP21.31■■□□□ 1
CLK3-217ENST00000566126 ZNF697Q5TEC3 545 aa21.31■■□□□ 1
CLK3-217ENST00000566126 SYMPKQ92797 1274 aaKnown RBP21.31■■□□□ 1
CLK3-217ENST00000566126 FKBP1CQ5VVH2 108 aa21.29■■□□□ 1
CLK3-217ENST00000566126 OGDHLQ9ULD0 1010 aa21.29■■□□□ 1
CLK3-217ENST00000566126 PTPRFP10586 1907 aa21.28■■□□□ 1
CLK3-217ENST00000566126 CXCL11O14625 94 aa21.28■■□□□ 1
CLK3-217ENST00000566126 GYG1P46976 350 aa21.28■■□□□ 1
CLK3-217ENST00000566126 HDLBPQ00341 1268 aaKnown RBP21.28■■□□□ 1
CLK3-217ENST00000566126 TRIM32Q13049 653 aa21.28■■□□□ 1
CLK3-217ENST00000566126 GCKRQ14397 625 aa21.28■■□□□ 1
CLK3-217ENST00000566126 NOL9Q5SY16 702 aaKnown RBP21.28■■□□□ 1
CLK3-217ENST00000566126 C8orf58Q8NAV2 365 aa21.28■■□□□ 1
CLK3-217ENST00000566126 PLIN1O60240 522 aa21.27■■□□□ 1
CLK3-217ENST00000566126 HMGCRP04035 888 aa21.27■■□□□ 1
CLK3-217ENST00000566126 TMOD2Q9NZR1 351 aa21.27■■□□□ 1
CLK3-217ENST00000566126 AK9Q5TCS8 1911 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 TNFRSF10AO00220 468 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 HIBADHP31937 336 aaKnown RBP21.26■□□□□ 0.99
CLK3-217ENST00000566126 CCDC30Q5VVM6 783 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 APOBEC3HQ6NTF7 200 aaKnown RBP21.26■□□□□ 0.99
CLK3-217ENST00000566126 TEKT1Q969V4 418 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 COA7Q96BR5 231 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 FAM84BQ96KN1 310 aaPredicted RBP21.26■□□□□ 0.99
CLK3-217ENST00000566126 ZDHHC15Q96MV8 337 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 SEMA6BQ9H3T3 888 aa21.26■□□□□ 0.99
CLK3-217ENST00000566126 HMX1Q9NP08 348 aaPredicted RBP21.26■□□□□ 0.99
CLK3-217ENST00000566126 A0A0G2JLL6 359 aaPredicted RBP21.25■□□□□ 0.99
CLK3-217ENST00000566126 PRRT2Q7Z6L0 340 aaPredicted RBP21.25■□□□□ 0.99
CLK3-217ENST00000566126 COL6A1P12109 1028 aa21.24■□□□□ 0.99
CLK3-217ENST00000566126 IFIT5Q13325 482 aaKnown RBP21.24■□□□□ 0.99
CLK3-217ENST00000566126 LRRC26Q2I0M4 334 aa21.24■□□□□ 0.99
CLK3-217ENST00000566126 MYLIPQ8WY64 445 aa21.24■□□□□ 0.99
CLK3-217ENST00000566126 FAM122AQ96E09 287 aa21.24■□□□□ 0.99
CLK3-217ENST00000566126 SLC45A1Q9Y2W3 748 aa21.24■□□□□ 0.99
CLK3-217ENST00000566126 PLXNB2O15031 1838 aa21.23■□□□□ 0.99
CLK3-217ENST00000566126 FOXO4P98177 505 aa21.23■□□□□ 0.99
CLK3-217ENST00000566126 FASTKD5Q7L8L6 764 aaKnown RBP21.23■□□□□ 0.99
CLK3-217ENST00000566126 RUNDC1Q96C34 613 aa21.23■□□□□ 0.99
CLK3-217ENST00000566126 ZNF594Q96JF6 807 aaPredicted RBP21.23■□□□□ 0.99
CLK3-217ENST00000566126 ANKRD13CQ8N6S4 541 aa21.22■□□□□ 0.99
CLK3-217ENST00000566126 SMCR8Q8TEV9 937 aaPredicted RBP21.22■□□□□ 0.99
CLK3-217ENST00000566126 MRIQ9BWK5 157 aa21.22■□□□□ 0.99
CLK3-217ENST00000566126 HOXD11P31277 338 aaPredicted RBP21.21■□□□□ 0.99
CLK3-217ENST00000566126 UBE4AQ14139 1066 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 GADL1Q6ZQY3 521 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 G2E3Q7L622 706 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 CCER1Q8TC90 406 aaPredicted RBP21.21■□□□□ 0.99
CLK3-217ENST00000566126 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 TTYH1Q9H313 450 aaPredicted RBP21.21■□□□□ 0.99
CLK3-217ENST00000566126 IFT57Q9NWB7 429 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 GJD2Q9UKL4 321 aa21.21■□□□□ 0.99
CLK3-217ENST00000566126 IQSEC3Q9UPP2 1182 aaPredicted RBP21.21■□□□□ 0.99
CLK3-217ENST00000566126 PHIPQ8WWQ0 1821 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
CLK3-217ENST00000566126 TJAP1Q5JTD0 557 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 TSPYL6Q8N831 410 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 CHMP3Q9Y3E7 222 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 ZHX2Q9Y6X8 837 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 MAST2Q6P0Q8 1798 aa21.2■□□□□ 0.98
CLK3-217ENST00000566126 FAM110CQ1W6H9 321 aa21.19■□□□□ 0.98
CLK3-217ENST00000566126 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
CLK3-217ENST00000566126 AFG3L2Q9Y4W6 797 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms