RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ZNF384Q8TF68 577 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 L3MBTL3Q96JM7 780 aaPredicted RBP9.33□□□□□ -0.92
CDH1-208ENST00000565810 STRBPQ96SI9 672 aaKnown RBP9.33□□□□□ -0.92
CDH1-208ENST00000565810 RIOK1Q9BRS2 568 aaKnown RBP9.33□□□□□ -0.92
CDH1-208ENST00000565810 NACAP1Q9BZK3 213 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 ARMT1Q9H993 441 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 HACL1Q9UJ83 578 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 SLC4A4Q9Y6R1 1079 aa9.33□□□□□ -0.92
CDH1-208ENST00000565810 CCDC171Q6TFL3 1326 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 SPDYE2BA6NHP3 402 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 PATL2C9JE40 543 aaKnown RBP9.32□□□□□ -0.92
CDH1-208ENST00000565810 SPDYE6P0CI01 402 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 EPS15P42566 896 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 C8orf34Q49A92 452 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 TBC1D10BQ4KMP7 808 aaPredicted RBP9.32□□□□□ -0.92
CDH1-208ENST00000565810 CDC42EP5Q6NZY7 148 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 CCDC129Q6ZRS4 1044 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 SAMD7Q7Z3H4 446 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 AMOTL1Q8IY63 956 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 LCORLQ8N3X6 602 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 PRMT6Q96LA8 375 aaPredicted RBP9.32□□□□□ -0.92
CDH1-208ENST00000565810 UPF2Q9HAU5 1272 aaKnown RBP9.32□□□□□ -0.92
CDH1-208ENST00000565810 ANO2Q9NQ90 1003 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 ATP8A2Q9NTI2 1148 aa9.32□□□□□ -0.92
CDH1-208ENST00000565810 RPAP1Q9BWH6 1393 aaPredicted RBP9.32□□□□□ -0.92
CDH1-208ENST00000565810 SHTN1A0MZ66 631 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 WNT10BO00744 389 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 VEGFAP15692 232 aaPredicted RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 EPHX2P34913 555 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 TNNI2P48788 182 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 GIMAP6Q6P9H5 292 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 USP50Q70EL3 339 aaPredicted RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 ZNF589Q86UQ0 364 aaPredicted RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 PNMA8AQ86V59 439 aaPredicted RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 SH3RF3Q8TEJ3 882 aaPredicted RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 TGFBRAP1Q8WUH2 860 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 DSCC1Q9BVC3 393 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 TDRD3Q9H7E2 651 aaKnown RBP9.31□□□□□ -0.92
CDH1-208ENST00000565810 VEZTQ9HBM0 779 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 CTNNA3Q9UI47 895 aa9.31□□□□□ -0.92
CDH1-208ENST00000565810 CLRN2A0PK11 232 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 EPB41L2O43491 1005 aaKnown RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 HSPD1P10809 573 aaKnown RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 MCCP23508 829 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 TDO2P48775 406 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 RHBDL3P58872 404 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 PICALMQ13492 652 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 TNFAIP1Q13829 316 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 NBPF9Q3BBW0 867 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 SPDYE2Q495Y8 402 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 SDR42E1Q8WUS8 393 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 ZBED3Q96IU2 234 aaPredicted RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 BACH2Q9BYV9 841 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 NAPBQ9H115 298 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 TAF1DQ9H5J8 278 aaPredicted RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 ZNF70Q9UC06 446 aaPredicted RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 PCDHAC2Q9Y5I4 1007 aa9.3□□□□□ -0.92
CDH1-208ENST00000565810 U3KPZ7 1027 aaPredicted RBP9.3□□□□□ -0.92
CDH1-208ENST00000565810 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 PRKAB2O43741 272 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 ENTPD3O75355 529 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 NPM3O75607 178 aaKnown RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 POLR3DP05423 398 aaPredicted RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 ALX1Q15699 326 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 EAPPQ56P03 285 aaPredicted RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 VPS53Q5VIR6 699 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 RNF20Q5VTR2 975 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 FKBP1CQ5VVH2 108 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 APOBEC3FQ8IUX4 373 aaKnown RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 MAPKAPK5Q8IW41 473 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 IFNL3Q8IZI9 196 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 TRPM4Q8TD43 1214 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 ZNF526Q8TF50 670 aaPredicted RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 DCPSQ96C86 337 aaKnown RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 IDI2Q9BXS1 227 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 LSG1Q9H089 658 aaKnown RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 IL25Q9H293 177 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 DCP1AQ9NPI6 582 aaPredicted RBP9.29□□□□□ -0.92
CDH1-208ENST00000565810 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
CDH1-208ENST00000565810 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 TCP10L2B9ZVM9 353 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 ZNF213O14771 459 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 WDHD1O75717 1129 aaPredicted RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 EGFRP00533 1210 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 FGAP02671 866 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 HLA-DOAP06340 250 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 SLC3A2P08195 630 aaKnown RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 PTH1RQ03431 593 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 NFIAQ12857 509 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 IMMTQ16891 758 aaKnown RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 ANGEL2Q5VTE6 544 aaKnown RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 FAM83AQ86UY5 434 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 MAP4K1Q92918 833 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 USP26Q9BXU7 913 aa9.28□□□□□ -0.92
CDH1-208ENST00000565810 DHX36Q9H2U1 1008 aaKnown RBP9.28□□□□□ -0.92
CDH1-208ENST00000565810 MCM9Q9NXL9 1143 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms