RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ERICH6Q7L0X2 663 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 FAM151AQ8WW52 585 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 FAM163AQ96GL9 167 aaPredicted RBP20.58■□□□□ 0.89
USB1-211ENST00000565662 WNK4Q96J92 1243 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 TEPSINQ96N21 525 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 ZIC5Q96T25 663 aa20.58■□□□□ 0.89
USB1-211ENST00000565662 GAKO14976 1311 aa20.57■□□□□ 0.88
USB1-211ENST00000565662 USP2O75604 605 aaPredicted RBP20.57■□□□□ 0.88
USB1-211ENST00000565662 WDHD1O75717 1129 aaPredicted RBP20.57■□□□□ 0.88
USB1-211ENST00000565662 GRIK5Q16478 980 aa20.57■□□□□ 0.88
USB1-211ENST00000565662 TMEM39BQ9GZU3 492 aa20.57■□□□□ 0.88
USB1-211ENST00000565662 TNNQ9UQP3 1299 aa20.57■□□□□ 0.88
USB1-211ENST00000565662 MAST2Q6P0Q8 1798 aa20.57■□□□□ 0.88
USB1-211ENST00000565662 SURF6O75683 361 aaKnown RBP20.56■□□□□ 0.88
USB1-211ENST00000565662 ADORA1P30542 326 aa20.56■□□□□ 0.88
USB1-211ENST00000565662 MAP3K9P80192 1104 aa20.56■□□□□ 0.88
USB1-211ENST00000565662 SPATA5Q8NB90 893 aa20.56■□□□□ 0.88
USB1-211ENST00000565662 ZNF512BQ96KM6 892 aaPredicted RBP20.56■□□□□ 0.88
USB1-211ENST00000565662 ABCF2Q9UG63 623 aa20.56■□□□□ 0.88
USB1-211ENST00000565662 RCAN3Q9UKA8 241 aa20.56■□□□□ 0.88
USB1-211ENST00000565662 PKN2Q16513 984 aaKnown RBP20.55■□□□□ 0.88
USB1-211ENST00000565662 RPAP2Q8IXW5 612 aaPredicted RBP20.55■□□□□ 0.88
USB1-211ENST00000565662 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.55■□□□□ 0.88
USB1-211ENST00000565662 ZNF341Q9BYN7 854 aa20.55■□□□□ 0.88
USB1-211ENST00000565662 TSKSQ9UJT2 592 aa20.55■□□□□ 0.88
USB1-211ENST00000565662 CASP8AP2Q9UKL3 1982 aa20.55■□□□□ 0.88
USB1-211ENST00000565662 ENTPD3O75355 529 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 RLBP1P12271 317 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 TNNI3KQ59H18 835 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 TTC39AQ5SRH9 613 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 CEP85Q6P2H3 762 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 CERS3Q8IU89 383 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 NOL10Q9BSC4 688 aaKnown RBP20.54■□□□□ 0.88
USB1-211ENST00000565662 IDI2Q9BXS1 227 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 FPGT-TNNI3KV9GXZ4 949 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 DOCK2Q92608 1830 aa20.54■□□□□ 0.88
USB1-211ENST00000565662 MROH7-TTC4A0A0A0MT08 1334 aa20.53■□□□□ 0.88
USB1-211ENST00000565662 AOX1Q06278 1338 aa20.53■□□□□ 0.88
USB1-211ENST00000565662 AK9Q5TCS8 1911 aa20.53■□□□□ 0.88
USB1-211ENST00000565662 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
USB1-211ENST00000565662 GTF2A2P52657 109 aa20.53■□□□□ 0.88
USB1-211ENST00000565662 DIXDC1Q155Q3 683 aa20.53■□□□□ 0.88
USB1-211ENST00000565662 ZCCHC17Q9NP64 241 aaKnown RBP20.53■□□□□ 0.88
USB1-211ENST00000565662 COL2A1P02458 1487 aaPredicted RBP20.52■□□□□ 0.88
USB1-211ENST00000565662 PLCG2P16885 1265 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 PDE3AQ14432 1141 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 CDC42EP5Q6NZY7 148 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 ERO1BQ86YB8 467 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 OPTNQ96CV9 577 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 ABHD8Q96I13 439 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 WRNIP1Q96S55 665 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 HMG20BQ9P0W2 317 aa20.52■□□□□ 0.88
USB1-211ENST00000565662 TESPA1A2RU30 521 aaPredicted RBP20.51■□□□□ 0.87
USB1-211ENST00000565662 VGLL4Q14135 290 aa20.51■□□□□ 0.87
USB1-211ENST00000565662 CTU1Q7Z7A3 348 aaKnown RBP20.51■□□□□ 0.87
USB1-211ENST00000565662 IFNL1Q8IU54 200 aa20.51■□□□□ 0.87
USB1-211ENST00000565662 CLMNQ96JQ2 1002 aa20.51■□□□□ 0.87
USB1-211ENST00000565662 SPDYE5A6NIY4 337 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 CACNB3P54284 484 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 DGKZQ13574 1117 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.5■□□□□ 0.87
USB1-211ENST00000565662 PANK1Q8TE04 598 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 C1orf115Q9H7X2 142 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 LRP2BPQ9P2M1 347 aa20.5■□□□□ 0.87
USB1-211ENST00000565662 RFX7Q2KHR2 1363 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 GPR75-ASB3A0A0A6YYF3 556 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 BAG3O95817 575 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 MECOMQ03112 1051 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 MKRN3Q13064 507 aaKnown RBP20.49■□□□□ 0.87
USB1-211ENST00000565662 MCOLN1Q9GZU1 580 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 ELP3Q9H9T3 547 aa20.49■□□□□ 0.87
USB1-211ENST00000565662 GPR25O00155 361 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 MCAMP43121 646 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 BTDP43251 543 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 PPATQ06203 517 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 PPIL2Q13356 520 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 ARHGEF6Q15052 776 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 RAI14Q9P0K7 980 aa20.48■□□□□ 0.87
USB1-211ENST00000565662 FKTNO75072 461 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 RAB11FIP3O75154 756 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 CETPP11597 493 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 SNAPC2Q13487 334 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 NOL9Q5SY16 702 aaKnown RBP20.47■□□□□ 0.87
USB1-211ENST00000565662 NSUN4Q96CB9 384 aaKnown RBP20.47■□□□□ 0.87
USB1-211ENST00000565662 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 ZNF112Q9UJU3 913 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 FZD1Q9UP38 647 aa20.47■□□□□ 0.87
USB1-211ENST00000565662 ATRNL1Q5VV63 1379 aa20.46■□□□□ 0.87
USB1-211ENST00000565662 CAPN15O75808 1086 aa20.46■□□□□ 0.87
USB1-211ENST00000565662 TCP10Q12799 353 aa20.46■□□□□ 0.87
USB1-211ENST00000565662 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
USB1-211ENST00000565662 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
USB1-211ENST00000565662 FAM198AQ9UFP1 575 aa20.46■□□□□ 0.87
USB1-211ENST00000565662 RGS3P49796 1198 aa20.45■□□□□ 0.86
USB1-211ENST00000565662 NAA16Q6N069 864 aaPredicted RBP20.45■□□□□ 0.86
USB1-211ENST00000565662 ZSCAN29Q8IWY8 852 aaPredicted RBP20.45■□□□□ 0.86
USB1-211ENST00000565662 ZNF296Q8WUU4 475 aaPredicted RBP20.45■□□□□ 0.86
USB1-211ENST00000565662 OTUD5Q96G74 571 aa20.45■□□□□ 0.86
USB1-211ENST00000565662 ERO1AQ96HE7 468 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms