RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 SLC27A2O14975 620 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 PRDX5P30044 214 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 TERF1P54274 439 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 KRT32Q14532 448 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 DOK7Q18PE1 504 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 SLF2Q8IX21 1173 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 KLHL34Q8N239 644 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 PALD1Q9ULE6 856 aa11.15□□□□□ -0.63
CNEP1R1-206ENST00000565556 PATL2C9JE40 543 aaKnown RBP11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 OFD1O75665 1012 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 MBD4O95243 580 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 PSMA5P28066 241 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 FKBP1AP62942 108 aaKnown RBP11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 GTF2IP78347 998 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 ALX1Q15699 326 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 MFSD14BQ5SR56 506 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 TTLL5Q6EMB2 1281 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 CERS3Q8IU89 383 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 TM6SF1Q9BZW5 370 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 JAG2Q9Y219 1238 aa11.14□□□□□ -0.63
CNEP1R1-206ENST00000565556 PPIP5K2O43314 1243 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 APPP05067 770 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 NCLP19338 710 aaKnown RBP11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 VPS53Q5VIR6 699 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 RASEFQ8IZ41 740 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZMYM6O95789 1325 aa11.13□□□□□ -0.63
CNEP1R1-206ENST00000565556 ECE2O60344 883 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 NEK4P51957 841 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 AOC3Q16853 763 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 IMMTQ16891 758 aaKnown RBP11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 STRIP1Q5VSL9 837 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 MIGA1Q8NAN2 632 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 ARMT1Q9H993 441 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 DBNDD1Q9H9R9 158 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 FER1L6Q2WGJ9 1857 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 MYH2Q9UKX2 1941 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 USP17L3A6NCW0 530 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 USP17L4A6NCW7 530 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 BAG3O95817 575 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 MBD3O95983 291 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 FGAP02671 866 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 MCM2P49736 904 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 USP17L1Q7RTZ2 530 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 ADGRA1Q86SQ6 560 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 LCORLQ8N3X6 602 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 FAM163AQ96GL9 167 aaPredicted RBP11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 PDLIM2Q96JY6 352 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 RIOK1Q9BRS2 568 aaKnown RBP11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 SLC4A4Q9Y6R1 1079 aa11.12□□□□□ -0.63
CNEP1R1-206ENST00000565556 FOXP2O15409 715 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 CYP21A2P08686 494 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 PLCG2P16885 1265 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 PPP4CP60510 307 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 GIMAP6Q6P9H5 292 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 LARGE2Q8N3Y3 721 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 JAKMIP1Q96N16 626 aaKnown RBP11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 CRNKL1Q9BZJ0 848 aaKnown RBP11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 NAPBQ9H115 298 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZSWIM6Q9HCJ5 1215 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 BCS1LQ9Y276 419 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 CYP46A1Q9Y6A2 500 aa11.11□□□□□ -0.63
CNEP1R1-206ENST00000565556 MROH7-TTC4A0A0A0MT08 1334 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 PSME4Q14997 1843 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 GSG1L2A8MUP6 293 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNF213O14771 459 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNF500O60304 480 aaPredicted RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 MCM5P33992 734 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 IARSP41252 1262 aaKnown RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 PKP1Q13835 747 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 LRSAM1Q6UWE0 723 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 IFNL3Q8IZI9 196 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 ZNF277Q9NRM2 450 aaPredicted RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 LAMA4Q16363 1823 aa11.1□□□□□ -0.63
CNEP1R1-206ENST00000565556 DYNLL1P63167 89 aaKnown RBP11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 GRIK5Q16478 980 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 BLOC1S2Q6QNY1 142 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 GPT2Q8TD30 523 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 MRIQ9BWK5 157 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 ATP8A2Q9NTI2 1148 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 AATFQ9NY61 560 aaKnown RBP eCLIP11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 SCN9AQ15858 1988 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 GAKO14976 1311 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 MYO3BQ8WXR4 1341 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 GPR75-ASB3A0A0A6YYF3 556 aa11.09□□□□□ -0.63
CNEP1R1-206ENST00000565556 TDO2P48775 406 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms